AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04175 ATGTCAGAACACAGCAGCACAGTAAGTACGGCAAGCATGCCGGATTTTAACCTACCTGATGAAATACTATCGGTAATACCAACGGATCCGTACGATCAATTAGATCTTGCTCGTAAGATTACATCAATGGCGCTTGCATCACGCGTATCGAAACTCGAATCAGAATCAGGTAGATTGAGGCAAAAATTGAATGAAAAGGATCGTGTTATAAATGAACTTGAAGAAAAAGTATCTGAACTTCAACAAACTTGTCATAGTGTTCAGTTACGGTTACAGATTACACTCGAAGATAATTCGAAACTTGCGGAAGAGAGAGATGCGTTGGCTATGACTACGAAGAAATTAGGGCGCGATTTAGCGAAGCTGGAGACATTCAAGCGACAACTAATGCAGTCATTGAACGATAATGATTCAACTCAAGCAGCAACTGTAGATATAGGAACATATGACCAATCTGGTCCCAGAGCTTATCCGGTTAAAGAAGAAGAAACAAATGGCTTAAGAAGGCACCGTTCTTTTAGTGGCTCTATAGAGGGTGGAAACATACCTGATGATGGATCAAAGCTTGCTGGTCAAAGGTTTTCTGTGACCCCGTATATCAGCACACGTGCAACTCCAACGGGAACTCCAAAGACGATCTCTACGAGTGTGTCTCCTAGAAGGTATTCTGCTTCTGGTACCACATCCCCTACAAGAATGCAATATGAAGGGCGTCATACAATGTCATCATGGTACCCATCAAGTCAGCAGTCTTCAGCTGGAAACTCTCCTCCTCGTGGTCCCCCAATACCAGGCCGTGCGTCTAAAATTGATGGAAAGGAGGTCTTCCGTCAAGCAAGGAGTCGTCTATCTTATGAGCAATTCAGTGCCTTTTTAGCGAATATAAAGGAGTTAAATGCTCAAAAGCAATCTCGTGAGGAGACATTGAGGAAGGCAGAAGAAATATTTGGGATTGATAACAAGGATCTTTATCTATCATTTCAAGCTCTGCTAAATCGCAACAAGCAATAA 1011 42.43 MSEHSSTVSTASMPDFNLPDEILSVIPTDPYDQLDLARKITSMALASRVSKLESESGRLRQKLNEKDRVINELEEKVSELQQTCHSVQLRLQITLEDNSKLAEERDALAMTTKKLGRDLAKLETFKRQLMQSLNDNDSTQAATVDIGTYDQSGPRAYPVKEEETNGLRRHRSFSGSIEGGNIPDDGSKLAGQRFSVTPYISTRATPTGTPKTISTSVSPRRYSASGTTSPTRMQYEGRHTMSSWYPSSQQSSAGNSPPRGPPIPGRASKIDGKEVFRQARSRLSYEQFSAFLANIKELNAQKQSREETLRKAEEIFGIDNKDLYLSFQALLNRNKQ 336
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04175 336 Coils Coil 295 315 - -
Lomi2g04175 336 MobiDBLite consensus disorder prediction 148 271 - -
Lomi2g04175 336 PANTHER OS03G0659800 PROTEIN 15 334 - -
Lomi2g04175 336 Coils Coil 56 90 - -
Lomi2g04175 336 MobiDBLite consensus disorder prediction 194 256 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04175 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:48307712 Lomi2g04175 Lomi-Chr2:47322718 dispersed
Lomi Lomi-Chr2:7238481 Lomi2g04175 Lomi-Chr2:47322718 dispersed
Lomi Lomi-Chr1:4592066 Lomi2g04175 Lomi-Chr2:47322718 wgd