AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04180 ATGGTGACTGACGTAACGTATTTGTGCTCCGTAATGAATCAACAGCAAGGGATAATGAATGATTCTAAATCAACGGCTCTAATTACTCGTGACTTGCTCGGTGGCGGTGGCTGTGATTCTGATTCATCGAAGGAATTAGACCTCGATTTACATGTTCCTTCTGGTTATGAAAAACGTCTCGATTTGAAGTCAGGAAAAGTGTACCTTCAGAGATGCAAATCCCCAAACACATCATCTTCATCATCTGATCATAAACCACAAGACAGTGATCAAACAGTTTCAAAGCTTCAGGACCTTAACTTCCCTCCATCAAAGAAGCCATTAAACCTATTCGATGACGCGAGTTTAGATCTTAATCTCGTAAACATATCATCCTCACCACCGGCTTACAGAAGTGTATGCACTTTGGACAAAGTTAAATTCGCACTGGAACGAGCAGAAAGGGAAACGATTAAGAAACGCTCAATTTCAATCTCGAAATCCTGCTCATCCCCGAACTCAAACTCTTCGTCCTCTATTAAAGAAACAACGGTTATTGAAGATGATGATCATGACGAAAAATTTTCTCAGGCTTATGCTGCTGGTTGTCCAAGTTGTTTGCTGTACGTGCTTATATCTCGAAGCAACCCTAGATGTCCTCGTTGCAATATGACCGTGCCATCCCCTATGGCGATGAAGAAACCGAGAATCGATCTTAACATATCTATATGA 711 41.35 MVTDVTYLCSVMNQQQGIMNDSKSTALITRDLLGGGGCDSDSSKELDLDLHVPSGYEKRLDLKSGKVYLQRCKSPNTSSSSSDHKPQDSDQTVSKLQDLNFPPSKKPLNLFDDASLDLNLVNISSSPPAYRSVCTLDKVKFALERAERETIKKRSISISKSCSSPNSNSSSSIKETTVIEDDDHDEKFSQAYAAGCPSCLLYVLISRSNPRCPRCNMTVPSPMAMKKPRIDLNISI 236
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04180 236 MobiDBLite consensus disorder prediction 157 176 - -
Lomi2g04180 236 MobiDBLite consensus disorder prediction 73 99 - -
Lomi2g04180 236 MobiDBLite consensus disorder prediction 73 101 - -
Lomi2g04180 236 PANTHER PUTATIVE-RELATED 43 234 - -
Lomi2g04180 236 MobiDBLite consensus disorder prediction 157 175 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04180 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
118629 Lomi11g01802 Lomi2g04180
122847 Lomi2g04180 Lomi5g01865
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr2:13150560 Lomi2g04180 Lomi-Chr2:47387307 dispersed
Lomi Lomi-Chr1:4680157 Lomi2g04180 Lomi-Chr2:47387307 wgd
Lomi Lomi-Chr11:26340911 Lomi2g04180 Lomi-Chr2:47387307 wgd
Lomi Lomi-Chr2:47387307 Lomi5g01865 Lomi-Chr5:30060972 wgd