AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04191 ATGGCTTTCACAGTAATCCCCAATCTCTCACCACCATCATTCACTCGAATTCATCTTCATAATTCATCACATAAACCCTCAATTTCATCATCATCTCATTCTCCAATTCACCATACTCATAACGGTTTTGCTCTACAATCCGCCGTAGAACCGCCGCCGGTTCGTGTTAGGGTTTCACCGCCGCCGGATCCTCGTCAGGATTTCTACGTTAATTTAGGCTTAGCTGTTCGTACTCTACGTCATGATTTACCTCTACTCTTTACTACAGACCTCAATTACGATATTTATAGGGATGATATTACCTTTGTTGATCCGTTAAACAAATTCACTGGGATTGATAATTACAAGCTCATTTTCAGAGCATTACGTTTCCATGGTCGAATTCTATTTAAAGACATTTCATTGGAGGTTTTTAGGGTTTGGCAGCCATCCGAGAATTTAATTTTGATCCGTTGGAATCTAAAAGGGATTCCTCGTGTTCCCTGGGAAGCGAAGGGCGAATTCCAGGGTACTTCACGGTATAAATTGGATAGGAATGGGAAGATTTACGAGCATAAAGTCGATAATTTGGCATTTAATTTCCCACGGCAGCTTAAACCGGCTATATCTGTTCTTGATTTGGTGGCTGCTAGTCCTCCTGCAACTCCTAACCCTACATTTTCATGGGGAAGTCTGGATTCAGCCTACTCATCTTCATGGCTAGATTTCTATCGTGCGGTTAAGAACACGTTGGATCCAGGCCAAGATTTTTCGGTTTTACAAGATTGTCAATTAGTTCCTGCTACTTGTCTATAG 795 41.64 MAFTVIPNLSPPSFTRIHLHNSSHKPSISSSSHSPIHHTHNGFALQSAVEPPPVRVRVSPPPDPRQDFYVNLGLAVRTLRHDLPLLFTTDLNYDIYRDDITFVDPLNKFTGIDNYKLIFRALRFHGRILFKDISLEVFRVWQPSENLILIRWNLKGIPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPRQLKPAISVLDLVAASPPATPNPTFSWGSLDSAYSSSWLDFYRAVKNTLDPGQDFSVLQDCQLVPATCL 264
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04191 264 Pfam Uncharacterized conserved protein (DUF2358) 75 185 IPR018790 -
Lomi2g04191 264 PANTHER RIKEN CDNA 2310061I04 GENE 33 209 IPR018790 -
Lomi2g04191 264 SUPERFAMILY NTF2-like 90 186 IPR032710 -
Lomi2g04191 264 Gene3D - 88 200 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04191 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
324171 Lomi2g04191 Lomi1g00451
333306 Lomi1g00451 Lomi2g04191
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr3:12971028 Lomi2g04191 Lomi-Chr2:47463789 transposed
Lomi Lomi-Chr1:4091093 Lomi2g04191 Lomi-Chr2:47463789 wgd