Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04209	ATGCTAGAGCTAGCTCAGGGGAACTCGTGCTTCGGTTGGGAGTTGATAAAAGACGTTATCAAGGAAACAGAAGAATTTGTGTTACGTACAGGAAGCGTTGGTGCGGGTTGCACTCAGCTTCTTTCTGATATGCAGGCTTTCAAGGCTGCAAATCCAGGGTGTATATTAGAAGATTTTATAAGATGGCACTCACCCCCTGATTGGACGGAAACATTAACAGACGATGAGAATAAAGAATCAGGTGGTGGTGATATCTCGCAATCTAGAGGACACTTAAGTATCTGTTTGCAGAAAGAAGGTAAGTTGTGGCGAGAACTATGGGAAACTGCAAAACCAATACCTGCTGTTAGACTGTCTCCATTATACTACGAGGATTTATCTGTGGAAGGGATTCTTCATGGTTTCAAGAATATCTCCCCTTCTGGTTTCTTTGAGCAGCTCTTTATTTCTCTTCTAACTTCTGGATGTGCGATTGCTGAGGCCAGAATATCAAGTAATGAATATGTGTACAAGCTGTTCAAGGAATGCAAAGACTACTTTATCATTAATTGTCAAAGCAAAAGTTGGGTCGAGAAATCCGATGACATATGCCAGGTGTATGAGCCGGTAATGGTGATGGCAATGAACCCAGATAAGGTTATAAGGCTCACAAAGGCACATCATGATGAGAACGAAGAAGACAACACAACAAATGCACATTCGTCCACAATGTTTTCAAAGAAGCCTCCCAAACTTACATCTCCTCCTGCTGCAGTTGAGGTTTTACCACTCCAAATTATGTAA	783	41.89	MLELAQGNSCFGWELIKDVIKETEEFVLRTGSVGAGCTQLLSDMQAFKAANPGCILEDFIRWHSPPDWTETLTDDENKESGGGDISQSRGHLSICLQKEGKLWRELWETAKPIPAVRLSPLYYEDLSVEGILHGFKNISPSGFFEQLFISLLTSGCAIAEARISSNEYVYKLFKECKDYFIINCQSKSWVEKSDDICQVYEPVMVMAMNPDKVIRLTKAHHDENEEDNTTNAHSSTMFSKKPPKLTSPPAAVEVLPLQIM	260

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04209	260	Pfam	Rab3 GTPase-activating protein catalytic subunit	17	134	IPR026147	-
	Lomi2g04209	260	PANTHER	RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT	18	227	IPR045700	GO:0005096(InterPro)\|GO:0005096(PANTHER)\|GO:0043547(InterPro)\|GO:0043547(PANTHER)
	Lomi2g04209	260	MobiDBLite	consensus disorder prediction	223	248	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04209	K18270	Rab3 GTPase-activating protein catalytic subunit

Event-related genes

Select	Gene_1	Gene_2	Event_name
	122851	Lomi2g04209	Lomi6g00358
	122852	Lomi2g04209	Lomi7g00249
	324159	Lomi2g04209	Lomi1g00437
	333318	Lomi1g00437	Lomi2g04209

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr2:47585106	Lomi3g02931	Lomi-Chr3:36078428	dispersed
	Lomi	Lomi-Chr1:3977305	Lomi2g04209	Lomi-Chr2:47585106	wgd
	Lomi	Lomi-Chr2:47585106	Lomi6g00358	Lomi-Chr6:3959322	wgd
	Lomi	Lomi-Chr2:47585106	Lomi7g00249	Lomi-Chr7:2453293	wgd