Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04211	ATGGCCAAAAGCTCCTTCAAGTTGGAACATCCTTTAGAGAGGCGACAAGCTGAGTCTGCTCGTATTAGGGAGAAGTATCCTGACAGAATTCCGGTTATTGTGGAGAAGGCTGAAAGAACTGACATACCTGACATTGACAAGAAGAAATATCTGGTACCTGCTGATCTGACTGTTGGACAGTTTGTGTATGTTGTGAGAAAGAGAATTAAGCTGAGTGCCGAAAAGGCCATCTTTATCTTTGTCAAGAACATTCTACCACCTACTGCTGCCATGATGTCTGCTATCTACGAAGAAAACAAAGACGAAGATGGTTTTCTTTACATGACTTACAGTGGAGAGAACACATTTGGATTACTTTGA	360	41.67	MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERTDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGLL	119

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04211	119	Pfam	Autophagy protein Atg8 ubiquitin like	14	117	IPR004241	-
	Lomi2g04211	119	SUPERFAMILY	Ubiquitin-like	3	117	IPR029071	-
	Lomi2g04211	119	MobiDBLite	consensus disorder prediction	1	20	-	-
	Lomi2g04211	119	PANTHER	MICROTUBULE-ASSOCIATED PROTEINS 1A-1B LIGHT CHAIN 3-RELATED	3	117	IPR004241	GO:0006995(PANTHER)
	Lomi2g04211	119	Gene3D	-	1	118	-	-
	Lomi2g04211	119	FunFam	Autophagy-related protein	1	117	-	-
	Lomi2g04211	119	CDD	Ubl-ATG8	12	114	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04211	K08341	GABA(A) receptor-associated protein

Event-related genes

Select	Gene_1	Gene_2	Event_name
	122853	Lomi2g04211	Lomi6g00355
	122854	Lomi2g04211	Lomi7g00252
	324158	Lomi2g04211	Lomi1g00435
	333319	Lomi1g00435	Lomi2g04211

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	3823383	Lomi	Lomi1g02518	Lomi-Chr1:37301413	Lomi2g04211	Lomi-Chr2:47605615
	3827776	Lomi	Lomi2g04211	Lomi-Chr2:47605615	Lomi8g01755	Lomi-Chr8:19793023
	3854310	Lomi	Lomi1g00435	Lomi-Chr1:3967446	Lomi2g04211	Lomi-Chr2:47605615
	3884932	Lomi	Lomi2g01840	Lomi-Chr2:17038590	Lomi2g04211	Lomi-Chr2:47605615
	3887831	Lomi	Lomi2g04211	Lomi-Chr2:47605615	Lomi6g00355	Lomi-Chr6:3933896
	3888074	Lomi	Lomi2g04211	Lomi-Chr2:47605615	Lomi7g00252	Lomi-Chr7:2483044