AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04213 ATGGAAGATGAGTATGGAATGTACAGGAAAGGAAGCAGTGGGTGGTCATGCATGGTGGGTAATGAAGAATATGAAGAAACTGATGTATGGTCTGTTTATAATGAAAGAAAAGATTTTGACTCAGAACCTGTGATGTCAAATGGATCATCTTCTACTTTGACTTCAAGAAGTTTTTCTCATTCAAGTACAGCCAGAATGATTCCTAGGCCTAATAGTGACAATCCTGACATCGAATCTCGGGTTCCTCAACAACAATCAGCACCTGTGAACATCCCTGATTGGTCAAAGATTTATGGAAAGTCAAAGAGATCGTCACAGAATTCTGCATTTCTTGATTATGGTAATAATGATGATGATGATGCTTATGGTGATCATAATGGGAAAGAAAGTTGGGACAGTGATGATGATGATGATAATGGTGCTGGGAACATGATGCCTCCCCATGAATGGATTGCACTGAAGCTTGCAAGAAGTCAAATTTCTTCATTTTCTGTATGTGAAGGTGCTGGAAGAACACTTAAGGGCAGAGATCTGAGTAGGGTAAGAAATGCTGTCTTGACCAAAACTGGATTTCTTGAATAA 582 39.18 MEDEYGMYRKGSSGWSCMVGNEEYEETDVWSVYNERKDFDSEPVMSNGSSSTLTSRSFSHSSTARMIPRPNSDNPDIESRVPQQQSAPVNIPDWSKIYGKSKRSSQNSAFLDYGNNDDDDAYGDHNGKESWDSDDDDDNGAGNMMPPHEWIALKLARSQISSFSVCEGAGRTLKGRDLSRVRNAVLTKTGFLE 193
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04213 193 MobiDBLite consensus disorder prediction 43 69 - -
Lomi2g04213 193 MobiDBLite consensus disorder prediction 39 145 - -
Lomi2g04213 193 MobiDBLite consensus disorder prediction 118 132 - -
Lomi2g04213 193 PANTHER EMB|CAB72159.1 21 192 - -
Lomi2g04213 193 MobiDBLite consensus disorder prediction 99 113 - -
Lomi2g04213 193 MobiDBLite consensus disorder prediction 76 91 - -
Lomi2g04213 193 Pfam Senescence regulator 22 193 IPR007608 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04213 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr14:14810234 Lomi2g04213 Lomi-Chr2:47625518 dispersed
Lomi Lomi-Chr1:37293386 Lomi2g04213 Lomi-Chr2:47625518 dispersed
Lomi Lomi-Chr2:47625518 Lomi8g00675 Lomi-Chr8:5180218 dispersed
Lomi Lomi-Chr2:17042951 Lomi2g04213 Lomi-Chr2:47625518 wgd