Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04224 | ATGCATGATTTTTGCTTTACGATCCCGTATGGAATGATAGTATTTTTTGGTGGGATTATTGGGTTCGCAAGAAAAGGTAGTACGACGTCGTTGGCCGGTGGTGTAGGCACTGGATTGTTGCTATTTCTTGCATCGTATCTTACTCTCAATGCTTTCCACAAGCGAAAGAATTCATGGTTTGGGTTGATTCTTGAAACTGTTATTGCTGCTGCCCTTACATGGTTTATGGGACAGCGATACGCTGAAACTGCTAAGATAATGCCTGCTGGTGTTGTTGCTGGTATTAGTGGATTAATGACAGCATTTTATCTCTATAAGATTGTGACAGGAGGTAACCATTTTTCGGCCAAGACAGAATGA | 360 | 41.67 | MHDFCFTIPYGMIVFFGGIIGFARKGSTTSLAGGVGTGLLLFLASYLTLNAFHKRKNSWFGLILETVIAAALTWFMGQRYAETAKIMPAGVVAGISGLMTAFYLYKIVTGGNHFSAKTE | 119 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04224 | 119 | Gene3D | - | 1 | 111 | IPR044890 | - | |
| Lomi2g04224 | 119 | PANTHER | TRANSMEMBRANE PROTEIN 14, 15 | 1 | 108 | IPR005349 | GO:0009706(PANTHER)|GO:0015245(PANTHER)|GO:0015908(PANTHER)|GO:0016020(InterPro) | |
| Lomi2g04224 | 119 | Pfam | Transmembrane proteins 14C | 6 | 103 | IPR005349 | GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04224 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3827784 | Lomi | Lomi2g04224 | Lomi-Chr2:47717060 | Lomi3g02344 | Lomi-Chr3:21616706 | |
| 3845480 | Lomi | Lomi2g04224 | Lomi-Chr2:47717060 | Lomi4g01189 | Lomi-Chr4:19391200 |