AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04227 ATGACGATCTACATGAATCGATTATTCGGCAAATCAAATTCAAGCTTTCTATTATCCAGCGGTAAAGCAATCAGATCACAAGTTGCACGTTTCAAAGACGACATGTTTTTAATCGACACCGGAATCGGAACACCTAAACTCACAATGCCGGACGAACTTCGTCCAATTCCGGCCAACCGTGACGTCACCAGATTCGAAAACAAAGTCGGATTCATGGAAGCAACAGCCGGTGAATCGTTAGTCAAAACACAGATCTTAGAGCGACTATTTATGGATTTAGTCGCCGGTGAGCCTGCGATGAAGGAACGAGCAACGGCTAGGTTTAATGATCTCGTCGGTGGTGCTACTGAAGCGGTTGCCGGTGAACCGGCGATTTTACTGCCACGTAGATTCACGCAGAATCAGGCGTGGGTGGAATTGAGAAAGGCGTGGCAGGCAAATAGAAAAGTGAAGGGATTTTTAATGGAGAAAATTAGAGGAGGTTATTCGGTTGCAGTGGGAGGTTATATTGCTTTTCTTCCGAATCGGCCGTTATTCGAAAGGCGAAAATTAGGGAGTGATCATTACATTATTGAGTCGATTAACTCGAAAAGGAAGAAGATTACTTTGTTTTAG 615 44.23 MTIYMNRLFGKSNSSFLLSSGKAIRSQVARFKDDMFLIDTGIGTPKLTMPDELRPIPANRDVTRFENKVGFMEATAGESLVKTQILERLFMDLVAGEPAMKERATARFNDLVGGATEAVAGEPAILLPRRFTQNQAWVELRKAWQANRKVKGFLMEKIRGGYSVAVGGYIAFLPNRPLFERRKLGSDHYIIESINSKRKKITLF 204
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04227 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3814582 Lomi Lomi10g02885 Lomi-Chr10:33439767 Lomi2g04227 Lomi-Chr2:47730424
3845481 Lomi Lomi2g04227 Lomi-Chr2:47730424 Lomi13g01197 Lomi-Chr13:15146506