AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04233 ATGGTTCAAACACTTGAAGCCATAAAGGGTGGTGGTGGATCCATCAAAGTTGGAACCACTGGCACCATTAATGCCTTAATGTCAAGGGAATTACAGTCAATTAAAGTTTCATCTCCAAGAGCAGTCCCATTCATAATGAAATCTCCAAAACGAGCCTTGGAACCTAACGATACTACTACAGGAACAAATCCTAAAGCAAAAGTAGAAGCAGATGAAGCAAGCACTAGTTGCAGCAACAACAATAGCCAAATGAATGAAAAGCACACTATCGTTCCTCAGAAAACGAAGCACCATCATGCTAGAAAAGATAGCAGGAATCCTTTTCTTCGTTCTGATAGCACGTCGGTTGATGGAAATGGAACTCCTATTAGAAGGAAGAATGACAAGAAGAGGTCTTGTATGGTTGAAATAGTTGACATAAAATGTTCAGTTCCTATGAATCCAATAACAAATAGGTTGAAGAAACTCACTTTCTTGAAGCTCTCTGAAACAAATGGCGTAAAGTAA 507 39.05 MVQTLEAIKGGGGSIKVGTTGTINALMSRELQSIKVSSPRAVPFIMKSPKRALEPNDTTTGTNPKAKVEADEASTSCSNNNSQMNEKHTIVPQKTKHHHARKDSRNPFLRSDSTSVDGNGTPIRRKNDKKRSCMVEIVDIKCSVPMNPITNRLKKLTFLKLSETNGVK 168
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04233 168 MobiDBLite consensus disorder prediction 72 89 - -
Lomi2g04233 168 PANTHER BNAA10G09140D PROTEIN 1 165 - -
Lomi2g04233 168 MobiDBLite consensus disorder prediction 49 130 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04233 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3828553 Lomi Lomi3g00748 Lomi-Chr3:6118462 Lomi2g04233 Lomi-Chr2:47762461
3832090 Lomi Lomi4g02618 Lomi-Chr4:33649934 Lomi2g04233 Lomi-Chr2:47762461
3887832 Lomi Lomi2g04233 Lomi-Chr2:47762461 Lomi6g00346 Lomi-Chr6:3849850