Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04235	ATGGCAACAACCAAATCACTGAAATCCAAGAAACCCCCAGCAACACCATCACCACCACCATCATCAAGATCTTCATCACTATCATCCCATCTCGCCATGATTGAACTCAAACAAACAATCTTGACATCAATTTCAAAACTTTCCGACCGAGACACCCACCAAATCGCCGTTGAAGATCTTGAAAAAATCATCCAAACCCTTTCACCAGATGGCATCACAATGCTTCTTAATTCACTCTACGATGCCACAAGTGACAACAACAAACCGGCGGTTAAAAAAGAATCAATTCGTTTACTTTACTTCTTATGTGCAACTCATACTGAATTAGCATCTACCCATTTGATAAAGATTATAGCCCACATTGTTAAAAGGCTTAAAGACTCTGATTCAGGTGTGAAAGACACGTGTCGTGATGCAATTGGACAACTTTCTTGTTTGTATTTGAAAGGGGAAAATGGGGTTGCTGTTGAGAATAATAATAATATTGGGTCTGTTGTTACGTTGTTTGTGAAGCCATTAATTGAAGCTTTGAATGATCAGAATAAAGGGGTTCAAGCTGGTTCAGCAATGTGTTTGGCAAAAATGGTGGAAATGGCTTCTGACCCACCTATTTTGGCTTTTCAGAAGCTTTGTGCTAGGATCTGCAAGTATCTTAATAACCCTAATTTCTTGGCTAAAGGTGCACTTTTGCAAGTGGTTTCTAGTCTTTCTCAGGTTGGTGCTATTTCTCCACAAGGCTTGGAGCCACTGCTTCAAAGTATTCACGACTGTCTTAGCAATTCTGATTGGGCAACTCGAAAAGCAGCTGCTGATGCATTGAATGCTTTGGCTTTGCATTCAAGCAACTTGATCACAGGAAAGACAGGGCCTACTATAACCGCCCTTGAGGCTTGCCGTTTTGATAAGATAAAACCTGCAAGAGACAGTATAATAGAAGCTTTGCAACAATGGCAAGGTCTTTCAGGAGGTTCTGAAGATCAGAAAGCATCTGGTCACGATGGTAAAGATTCTAAACCAGTTAAGTCGGATGAAAGAAAAACAGAGGCCCCACCAAAAAATGATGAACCGGAGGGTAGTAACATACCTGAGAAGGCCGCTGGAATTTTGAAAAAGAAAGCACCTGCTTTGAGTGATAAAGAACTAAACCCGGAGTTCTTTCAAAGACTTGAGAGTCGGGTTTCTGGTGAAGTTGAAGTGGTCGTCCCTCGAAGATTTGTGAAGTCCTCTAATGGGCAAAATGGAGAAGAGTCAAGCCTTAATGACACAGATGTCGGTTCACAGTCAAAAGAGAGCTACCAAAAAGTGGATCGAGGAATTGGTGGTCCTTCTAGAAGGCGAGAATTCGAAGATACGAATGACCTGAGTCAAAGGGAGGGATTTAGGAATAATAAAGGAAATTGGTTGGCTATTCAGAGGCAATTACTGCAACTGGAGAGGCAACAGGCTCATCTCATGAACATGTTGCAGGATTTCATGGGTGGATCTCATGATGGCATGTTGACTCTGGAGAACAGAGTGCGGGGTCTTGAGCGAGTAGTTGAAGACATGGCACGTGATCTGTCACTATCGAGTAATAATCGAAGAGGTGGAAATTATATGATGGGATTTGAGGAATCAGGTAGACCATTAGGCAAGTACAACGGCTTTTCCGATTATCCCAATACCAAATTAGGTAGGAATGATGACCCGATTTCTTACATGGGTTCAAGTATGAGGGGTAGAGGATCTTCATGGAGAGCAGACGGACCCGAAAATTGGGACTACCCTTCATATGGGGGCAGAAATCCGCAGATGGGTTTAAGGAGGGGTATGGATGGTAGGTCACCTAAATCTGAAAACGAAACTGAACCCGTTAATAGGAGAGGTTGGGGGGATAAAGTGTCTGGGCCTGCTAGGTTCGGGGAGGGCCCGTCGGCTAGAAGTGTTTGGCAAGCTTCGAAAGATGAAGCTACGTTGGAAGCAATTAGGGTGGCGGGGGACGACAACGGGCCTGCCCGAACTGCCCAAGTAGCAGTTCCTGAAATGACTGCTGAAGCAATGGGTGATGAGAATGTGCAGGATCGGGGCCCAGTTTGGACGGCTTGGAGTAATGCCATGGATGCACTTCATGTGGGTGATGCTGATACAGCTTTTGCTGAAGTTTTGTCCACAGGAGATGATTTATTACTTGTGAAGCTAATGGACAGAACGGGCCCAGTAATTGATCAGCTCTCAAGTGAAGTCGGGACTGAAGTTCTGCATGCTATTGCCCAGTTTCTTCCTGACCAAAAAGTGTTTGATATCTGCTTGTCCTGGCTTCAACAGTTGCTCGATATGATTGTAGAGAATGGAACAGATAATGTGGAACTCCCAATGGAATTGAAAAAGGAGATTTTGGTGAATTTAAATGAGGCGGCTTCAACCATTGAACCACCTGAAGACTGGGAAGGCATGGTGCCAGACCAACTTTTGTTGCAGTTGGCATCTGCATGGGAATTTGATCTGCATCAGCTAGACAAGTGA	2502	44.04	MATTKSLKSKKPPATPSPPPSSRSSSLSSHLAMIELKQTILTSISKLSDRDTHQIAVEDLEKIIQTLSPDGITMLLNSLYDATSDNNKPAVKKESIRLLYFLCATHTELASTHLIKIIAHIVKRLKDSDSGVKDTCRDAIGQLSCLYLKGENGVAVENNNNIGSVVTLFVKPLIEALNDQNKGVQAGSAMCLAKMVEMASDPPILAFQKLCARICKYLNNPNFLAKGALLQVVSSLSQVGAISPQGLEPLLQSIHDCLSNSDWATRKAAADALNALALHSSNLITGKTGPTITALEACRFDKIKPARDSIIEALQQWQGLSGGSEDQKASGHDGKDSKPVKSDERKTEAPPKNDEPEGSNIPEKAAGILKKKAPALSDKELNPEFFQRLESRVSGEVEVVVPRRFVKSSNGQNGEESSLNDTDVGSQSKESYQKVDRGIGGPSRRREFEDTNDLSQREGFRNNKGNWLAIQRQLLQLERQQAHLMNMLQDFMGGSHDGMLTLENRVRGLERVVEDMARDLSLSSNNRRGGNYMMGFEESGRPLGKYNGFSDYPNTKLGRNDDPISYMGSSMRGRGSSWRADGPENWDYPSYGGRNPQMGLRRGMDGRSPKSENETEPVNRRGWGDKVSGPARFGEGPSARSVWQASKDEATLEAIRVAGDDNGPARTAQVAVPEMTAEAMGDENVQDRGPVWTAWSNAMDALHVGDADTAFAEVLSTGDDLLLVKLMDRTGPVIDQLSSEVGTEVLHAIAQFLPDQKVFDICLSWLQQLLDMIVENGTDNVELPMELKKEILVNLNEAASTIEPPEDWEGMVPDQLLLQLASAWEFDLHQLDK	833

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04235	833	MobiDBLite	consensus disorder prediction	321	362	-	-
	Lomi2g04235	833	MobiDBLite	consensus disorder prediction	591	639	-	-
	Lomi2g04235	833	MobiDBLite	consensus disorder prediction	439	457	-	-
	Lomi2g04235	833	MobiDBLite	consensus disorder prediction	408	459	-	-
	Lomi2g04235	833	MobiDBLite	consensus disorder prediction	328	359	-	-
	Lomi2g04235	833	SMART	TOG-3	59	309	IPR034085	-
	Lomi2g04235	833	SUPERFAMILY	ARM repeat	36	801	IPR016024	-
	Lomi2g04235	833	Gene3D	-	153	304	IPR011989	-
	Lomi2g04235	833	PANTHER	MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1	23	825	IPR033337	GO:0005874(InterPro)\|GO:0007275(PANTHER)\|GO:0008017(InterPro)\|GO:0008017(PANTHER)\|GO:0009826(PANTHER)\|GO:0010005(PANTHER)\|GO:0010031(PANTHER)
	Lomi2g04235	833	Coils	Coil	499	519	-	-
	Lomi2g04235	833	Gene3D	-	22	151	IPR011989	-
	Lomi2g04235	833	MobiDBLite	consensus disorder prediction	605	621	-	-
	Lomi2g04235	833	MobiDBLite	consensus disorder prediction	1	28	-	-
	Lomi2g04235	833	MobiDBLite	consensus disorder prediction	408	433	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04235	K28093	microtubule-associated protein TORTIFOLIA1 and related proteins

Event-related genes

Select	Gene_1	Gene_2	Event_name
	122858	Lomi2g04235	Lomi7g00263
	324145	Lomi2g04235	Lomi1g00418
	333332	Lomi1g00418	Lomi2g04235

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	3827788	Lomi	Lomi2g04235	Lomi-Chr2:47776007	Lomi3g00403	Lomi-Chr3:3465353
	3854297	Lomi	Lomi1g00418	Lomi-Chr1:3793504	Lomi2g04235	Lomi-Chr2:47776007
	3888076	Lomi	Lomi2g04235	Lomi-Chr2:47776007	Lomi7g00263	Lomi-Chr7:2572167