Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04240	ATGATGAATATTTTCCGGAAAGACCCAGGACTAGCAACTGATTCATTTTATGAGGTTAGAGCTGGATGCACTGATGTTCCTGATACCAAATTTAGGATCAAGTCCGGAAAGACGTTAAGTCTAAAAAGGTGGCTGGCTGCATTTACACCAGAAGGTTCTCTAGATATAGGCAAGTGTCTTGATCGAATATATCGTGGAGGGATTCATCCATCAATTAGAGGAGAAGTGTGGGAATTTCTGGTTGGTTGTTACGATCCTAAAAGCACATTTGATGAACGAGAAGAGATACGACATAGACGAAGGGAGGAATATGCTGAGTTAAAAGAATCATGCAGACACATGTTTCCTGTTGTTGGAAGTGGCAAGTTTGTAACTGCACGTGTGATTACAGCAAATGGCGATCCAATTCAAGATCCAGTTGTATTCTTAGGGAAAAATCTTGATGAGCTTCCAACCCCACAAGATCAAGAAAGTGTTGGCCTGAGTCCAGCCACAGGATTTACTCGGGAGCATGATAAGGAAATAATTCAATGGAAGCTTGCTCTACATCAAATAGGTCTTGATGTGGTCCGCACGGACAGAATGCTAATGTTTTACGAGAAGCAAGAGAATCTGGCAAAACTTTGGGATGTTCTTGCTGTCTATGCTTGGCATGATAAAGATGTTGGTTATGGTCAAGGGATGAGTGATCTTTGCTCCCCTATGATTATGCTTCTTGAACATGAAGCAGATGCATTTTGGTGCTTTGAACGTTTAATGCGCAGAGTGCGAGGGAATTTCAGGTGCACGGGTAACTCTGTGGGGGTTGAGGCACAACTCGATAATTTGGCTAATGTCACTCAAGTTGTTATGCCTAAACTTCACCGACATTTAGAACACCTTGGTGGAGGCGGTTACCTATTTGCGTTCCGAATGCTCATGGTGTTGTTCCGGCGAGAATTATCTTTCGGAGATTCGTTGTACTTGTGGGAGATGTTGTGGGCTTTAGAGTATGATCCCGAATTGTTTACATTGTATGAGGGAGGTGAAACTCATGATAAATCTGATGTTCACAAAACAACACGAAAATCCAGACGCCAATATGGCAAGTATGAAAGAGCAAACAGGAGAAGTAGGGCTGGGGCCAGAGGTGGGCCTGGATCCGCGACACCATTTTCCATTTTTGTTTTTCTTGTAGCAAGTGTCCTCAAGGATAGGAGTGACAAGTTATTAAAAGAAGCAAGGGGACTAGACGATGTTGTAAAGATATTAAATGACATATCCGGAAATATGGATGCCAAGAAAGCTTGCATAGGGGCCATGAAGATTCACAAAAAGTATCTAAGAAGGCGAAAGAACCAGTGA	1344	42.63	MMNIFRKDPGLATDSFYEVRAGCTDVPDTKFRIKSGKTLSLKRWLAAFTPEGSLDIGKCLDRIYRGGIHPSIRGEVWEFLVGCYDPKSTFDEREEIRHRRREEYAELKESCRHMFPVVGSGKFVTARVITANGDPIQDPVVFLGKNLDELPTPQDQESVGLSPATGFTREHDKEIIQWKLALHQIGLDVVRTDRMLMFYEKQENLAKLWDVLAVYAWHDKDVGYGQGMSDLCSPMIMLLEHEADAFWCFERLMRRVRGNFRCTGNSVGVEAQLDNLANVTQVVMPKLHRHLEHLGGGGYLFAFRMLMVLFRRELSFGDSLYLWEMLWALEYDPELFTLYEGGETHDKSDVHKTTRKSRRQYGKYERANRRSRAGARGGPGSATPFSIFVFLVASVLKDRSDKLLKEARGLDDVVKILNDISGNMDAKKACIGAMKIHKKYLRRRKNQ	447

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04240	447	MobiDBLite	consensus disorder prediction	344	372	-	-
	Lomi2g04240	447	SUPERFAMILY	Ypt-Rab-GAP domain of gyp1p	52	290	IPR035969	-
	Lomi2g04240	447	PANTHER	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	60	421	-	GO:0005096(PANTHER)\|GO:0090630(PANTHER)
	Lomi2g04240	447	Gene3D	putative rabgap domain of human tbc1 domain family member 14 like domains	168	260	-	-
	Lomi2g04240	447	ProSiteProfiles	TBC-rab GAP domain profile.	67	330	IPR000195	-
	Lomi2g04240	447	SUPERFAMILY	Ypt-Rab-GAP domain of gyp1p	268	440	IPR035969	-
	Lomi2g04240	447	Gene3D	-	266	447	-	-
	Lomi2g04240	447	FunFam	TBC1 domain family member 15-like	164	260	-	-
	Lomi2g04240	447	MobiDBLite	consensus disorder prediction	344	379	-	-
	Lomi2g04240	447	Pfam	Rab-GTPase-TBC domain	170	330	IPR000195	-
	Lomi2g04240	447	SMART	tbc-4	64	355	IPR000195	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04240	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	118683	Lomi11g01877	Lomi2g04240
	122862	Lomi2g04240	Lomi5g01994

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	3818812	Lomi	Lomi13g00535	Lomi-Chr13:7201405	Lomi2g04240	Lomi-Chr2:47814895
	3827791	Lomi	Lomi2g04240	Lomi-Chr2:47814895	Lomi5g01414	Lomi-Chr5:24323648
	3867179	Lomi	Lomi11g01877	Lomi-Chr11:27152194	Lomi2g04240	Lomi-Chr2:47814895
	3886605	Lomi	Lomi2g04240	Lomi-Chr2:47814895	Lomi5g01994	Lomi-Chr5:30996910