Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04245	ATGTCCGCTACACCTTACGATCTCGGATCGTTCACGTTTCAACCGATCAAAGAAGCGATCGTATCTCGTGAGATGACAAGGAGGTACATGACAGATATGATTACGTACGCTGATACTGATGTAGTTATTGTTGGTGCTGGATCTGCTGGTCTCTCCTGTGCTTATGAACTTAGCAAAAACCCTAACGTTCAGGTAGCTATCATTGAGCAATCTGTGAGCCCTGGTGGTGGAGCATGGCTCGGTGGACAACTATTTTCAGCAATGGTTGTCCGCAAGCCAGCCCACCACTTCCTTGACGAGCTCGAGATCGAGTACGATGAGCAAGAAGACTACGTCGTCATCAAGCACGCAGCTTTGTTTACCTCCACAATCATGAGCAAACTTTTGGCCAGGCCGAATGTGAAGCTCTTTAATGCGGTTGCAGCTGAGGATTTGATCATCAAGGGTGACAGAGTAGCTGGAGTTGTGACCAACTGGGCGTTGGTCGCAATGAACCACGACACACAATCGTGCATGGACCCTAATGTTATGGAGTCTAAGGTGGTTGTGAGCTCGTGCGGCCATGATGGTCCCATGGGTGCTACTGGAGTTAAGAGGCTTAGGAGTGTTGGGTTGATCGAGAGCGTTCCTGGGATGAAAGCTCTTGACATGAACGCTGCTGAAGATGCCATTGTCAAGCTGACTAGAGAAATTGTTCCTGGTATGATTGTCACAGGCATGGAAGTTGCTGAGATCGACGGATCTCCAAGAATGGGGCCAACTTTTGGGGCTATGATGATATCTGGACAGAAGGCGGCTCATTTGGCGTTGAAGGCGTTGGGGCTTCCAAATGCGTTGGATGGAACACTTGTGGGAAGCATGCACCCAGAGTTGATCCTTGCTGCAGCTGATGCTGGTGAGACCGTGGATGCGTAA	915	49.73	MSATPYDLGSFTFQPIKEAIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKGDRVAGVVTNWALVAMNHDTQSCMDPNVMESKVVVSSCGHDGPMGATGVKRLRSVGLIESVPGMKALDMNAAEDAIVKLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGTLVGSMHPELILAAADAGETVDA	304

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04245	304	NCBIfam	sulfide-dependent adenosine diphosphate thiazole synthase	18	273	IPR002922	-
	Lomi2g04245	304	Hamap	Thiamine thiazole synthase, chloroplastic [THI4].	1	282	IPR027495	GO:0009228(InterPro)
	Lomi2g04245	304	PRINTS	Adrenodoxin reductase family signature	40	62	-	-
	Lomi2g04245	304	PRINTS	Adrenodoxin reductase family signature	208	221	-	-
	Lomi2g04245	304	PRINTS	Adrenodoxin reductase family signature	64	77	-	-
	Lomi2g04245	304	PANTHER	THIAMINE THIAZOLE SYNTHASE	2	303	-	-
	Lomi2g04245	304	Pfam	Thi4 family	22	255	-	-
	Lomi2g04245	304	Gene3D	-	7	37	-	-
	Lomi2g04245	304	SUPERFAMILY	FAD-NAD(P)-binding domain	9	266	IPR036188	-
	Lomi2g04245	304	Gene3D	-	38	273	IPR036188	-
	Lomi2g04245	304	FunFam	Thiamine thiazole synthase, chloroplastic	38	273	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04245	K03146	cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	122864	Lomi2g04245	Lomi6g00342
	122865	Lomi2g04245	Lomi7g00270
	324139	Lomi2g04245	Lomi1g00412
	333338	Lomi1g00412	Lomi2g04245

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	3854291	Lomi	Lomi1g00412	Lomi-Chr1:3741020	Lomi2g04245	Lomi-Chr2:47840460
	3887833	Lomi	Lomi2g04245	Lomi-Chr2:47840460	Lomi6g00342	Lomi-Chr6:3811038
	3888078	Lomi	Lomi2g04245	Lomi-Chr2:47840460	Lomi7g00270	Lomi-Chr7:2626782