Gene detail

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Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04255	ATGGAATCGATAATAGCTAGGGCGTTAGAATACACTCTCAAGTACTGGCTTAAATCATTTACTAGAGATCAGTTCAAATTACAAGGACGTACTGTTCAGCTCTACAATTTAGATATAAATGGTGATGCTTTGCATGCGAGCCTTGGATTACCTCCGGCATTGAATGTCACAACAGCAAAAGTCGGGAAGTTAGAGATTATTCTTCCTTATTTGAGCAATGTACAAGTTGAGCCGATTGTTGTGCAAATCGATAAGCTCGATTTGGTATTGGAGGAAAATGATGATTTGGATGCATATAAGACTACAGACAGTGCACCAACGCCATCCAGTCCTTCGAAAGGCAGCGGATATGGATTCGCTGACAAGATTGCAGATGGGATGACATTGGAAATCCGGACTGTCAATCTCTTACTTGAAACTCATGGAGGTGGTAGACGTCGAGGAGGGGCAACTTGGGCATCACCTATGGCGTCCCTTACCATCCGCAACCTCTTGCTTTATACCACGAATGAGAACTGGCAGGTTGTAAACCTTAAAGAAGCTAGGGACTTCTCAAATGACAAGAAGTTCATCTATGTGTTCAAAAAGCTTGAATGGGAGCATCTATCTATCGACCTCCTGCCTCACCCTGATATGTTTGCAGCATTTTCTGAAGGTGCATTCAAGGAAGAAGATGGTGCAAAGCGCGTATTCTTTGGCGGGGAGCGCTTCCTTGAAGGAATATCCGGAGAAGCTTATATTACCATCCAAAGGACAGACCTTAATAGTCCACTAGGGTTGGAACTCCAGTTACATATTACTGAAGCCTTGTGCCCTGCTTTGAGCGAACCAGGTCTACGAGCTCTTCTTCGTTTTTTTACGGGATTGTATATCTGTCTAAATAGAGGAGATGTTAATCCAAATTTTCAAGAGCGGTTAGCAGAAGCTGCAGGACGTACACTAGTCTCCATTATGGTGGATCATATATTTTTCTGTATCAAGGATACTGATTTCCAGTTAGAACTTTTGATGCAGTCACTTCTCTTTTCTCGGGCAAGTCTTTCTGATGGCGAAATCACCAAATGCTTAACTAGGGTGATGATTGGTGGACTATTTCTGCGTGATACTTCTTCTCGCCCACCATGTGCATTAGTGCAACCATCAATGCAGGATGCTTCAGAGAAACCACTGCACATTCCAGATTTTGGAAAGGAATTTTGTCCTCCAATATATCCATTAGGGGATCAGCAGTGGAAATTAGGTGACCGTGCTCCACTCATGTCCCTCCATTGTCTTCAGTTTATGCCCTCGCCTAACCCGCCATCAATTTCTTCACAAACCGTCATTGACTGCCAGCCTCTTATGATACATCTTCAAGAAGAGTCGTGTCTGAGAATATCATCCTTACTAGCTGATGCAATTTTGGTTAATGCTGGTGATATTTCACCAGATTTCTCAGTCAACTCTCTTGAAGTCAAAGTCAAAGGATTAGATATCACTGTTCCACTGGAAAGTAAGAACGAGAGCTCCTTTACTGGAGCAACACTTCACATTGAGAACCTATTCTATCACGAGTCACCTTCTCTGAGGCTCCGACTGCTCAATCTTGACAAGGATCCTGCATGCTTCTGCCTCTGGAAGGGTCAACCGATTGATGCCAGCCAAAAAAAGTGGACAAGTGGAGTGTCTTTGTTTAATATGTCTCTAGAAAGATGTGATCCGAGAGGAGTTAATGGGTCCTGTTCAAACTCTTCAAAATTGTGGAAATGTGTCGAGATGAAAGGTGTTTGTATTCAGGTAGCAATGGTAACAGCAGATGGAAGGCCATTAATAGAAGTCCCTCCCCCAGGAGGAGTTGTTAGGGTTGGTGTTGCTTGTGAACAATATCTTTCTAACACTTCTGTTGAACAACTATTTTTTGTGTTGGATCTATATACATATTTTGGTACAGTCAGCGAGAAAATGGCCTTGGTTGGAAGTAAACAAAAGAAGGTGGTGAAGCCTGAACTTTCTAATGGAAGTTTGATAGAAAAGGTTCCTGGTGATACTGCTGTTAGTTTAGCAGTTAAAGACCTAAAACTAACATTTCTAGAATCTTCCTCCATTCCTATTCAAGGGATGCCTCTAGTTCAATTTGTTGGGGACGATCTGTTCATGGAAGTTACTCATAGAACCTTGGGTGGTGCCATGGCCATTTCATCAACTTTAAGGTGGGATAGGGTTCAGGTGGACTGTGCAGAAACTGAGATAACCTCGATACATGCAAACGGCTCCATGCCAAATGCTACCGAGGATTTACTTCCTGTTCCAAATGGCTACCCTAAGTTAAGGGCTGTCTTTTGGGTGCAAGATGGAAGAAACTTTCCGTTTTTGAATTTAAATATGGTGCATGTTATTCCATATAATGCACGTGATACAGAGTGTCATAGTTTAAGTGTGTCGGCTTGTATTGCGGGTGTACGCCTAGCAGGAGGAATGAATTATGCTGAAGCTCTGTTACACCGCTTTGGAATTCTAGGACCAGATGGTGGGCCAGGGGTTGGGCTCTCCAAGGGCTTGGACCATTTATCTGCAGGACCATTGTCGAAACTTTTCAAAGCATCACCTCTGCTTGTTGAGGAGGTCAGGGAGAGTAAAAGTGAAAGCATTGTTGAAGAGAAGCATAGTGGTTACTTACACCTTGGTGCACCGGATGATGTGGATATAACACTAGAATTGAAGGACTGGTTATTTGCATTGGAGGGTGCAGAGATGGCAGAAAATTGGTTGTTCTGTGGTTCAGAGGATTCCTACAGAGAAGAGAGGTGCTGGCACACAACTTTTGACAGTTTCAAAGTTAAAGCAAACAGCAGCCAAAAGCACTCGGTTAATGGCAAAAAGAAGTTACCTGGAGCACATAAGTATCCTGTTGAATCATTGACGGTTGGTGTTGCAGGCTTGAAAACAGTGAAACCCCAGTATGGGAAGGGAGTTGCACCTGAAAATGGGCACAAGCATACTGTCGAATCACATGGTGGGGTAGATCTTGAAGCTGACATAATGTTAAATGAAGATGGTGGTGACAATGGGATGGTTAAATGGGTGGCAGAAAGCTTAAAATTTTCTGTGAAACATCCGGTGGAGGCAATTGTAACCAAGGATGAGCTGCAACATGTTGCTCAATTATGCAAGTCAGAAGTTGACTCCATGGGCCGAATAACTGCTGGGGTTTTACGTCTATTGAAGTTAGAAGGATCAGTTGGTCAGACAACAATAGATCAACTAAGCAATCTTGGAAGTGATGGGTTTGACAAGATATTCTCCCGAGACAACCTCCGCCGAGATAGTAATGCTTCTAGTGTTAGGTTGAGCCCGTCTTCCCTAGTGGCTTCTGATAACCAATTTTCTTCATCCTTCAACTCAACATTAATTTCACTTGAGGCTGCGTTATTAGATACACAATCAAATTGTGCGTCTCTTGCCTCTGAATTAAGCAGGTCTGAATCTTCCAAGCCACACCTTCAAAGCGTAGAACAACTCACCCAGAAACTAGAGGGTATGCAGAAATTGTTAACAGAATTGCAGTCTCAAGTATAG	3555	43.07	MESIIARALEYTLKYWLKSFTRDQFKLQGRTVQLYNLDINGDALHASLGLPPALNVTTAKVGKLEIILPYLSNVQVEPIVVQIDKLDLVLEENDDLDAYKTTDSAPTPSSPSKGSGYGFADKIADGMTLEIRTVNLLLETHGGGRRRGGATWASPMASLTIRNLLLYTTNENWQVVNLKEARDFSNDKKFIYVFKKLEWEHLSIDLLPHPDMFAAFSEGAFKEEDGAKRVFFGGERFLEGISGEAYITIQRTDLNSPLGLELQLHITEALCPALSEPGLRALLRFFTGLYICLNRGDVNPNFQERLAEAAGRTLVSIMVDHIFFCIKDTDFQLELLMQSLLFSRASLSDGEITKCLTRVMIGGLFLRDTSSRPPCALVQPSMQDASEKPLHIPDFGKEFCPPIYPLGDQQWKLGDRAPLMSLHCLQFMPSPNPPSISSQTVIDCQPLMIHLQEESCLRISSLLADAILVNAGDISPDFSVNSLEVKVKGLDITVPLESKNESSFTGATLHIENLFYHESPSLRLRLLNLDKDPACFCLWKGQPIDASQKKWTSGVSLFNMSLERCDPRGVNGSCSNSSKLWKCVEMKGVCIQVAMVTADGRPLIEVPPPGGVVRVGVACEQYLSNTSVEQLFFVLDLYTYFGTVSEKMALVGSKQKKVVKPELSNGSLIEKVPGDTAVSLAVKDLKLTFLESSSIPIQGMPLVQFVGDDLFMEVTHRTLGGAMAISSTLRWDRVQVDCAETEITSIHANGSMPNATEDLLPVPNGYPKLRAVFWVQDGRNFPFLNLNMVHVIPYNARDTECHSLSVSACIAGVRLAGGMNYAEALLHRFGILGPDGGPGVGLSKGLDHLSAGPLSKLFKASPLLVEEVRESKSESIVEEKHSGYLHLGAPDDVDITLELKDWLFALEGAEMAENWLFCGSEDSYREERCWHTTFDSFKVKANSSQKHSVNGKKKLPGAHKYPVESLTVGVAGLKTVKPQYGKGVAPENGHKHTVESHGGVDLEADIMLNEDGGDNGMVKWVAESLKFSVKHPVEAIVTKDELQHVAQLCKSEVDSMGRITAGVLRLLKLEGSVGQTTIDQLSNLGSDGFDKIFSRDNLRRDSNASSVRLSPSSLVASDNQFSSSFNSTLISLEAALLDTQSNCASLASELSRSESSKPHLQSVEQLTQKLEGMQKLLTELQSQV	1184

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04255	1184	Pfam	VPS13-like, N-terminal	1	100	IPR026854	-
	Lomi2g04255	1184	Coils	Coil	1163	1183	-	-
	Lomi2g04255	1184	PANTHER	UNCHARACTERIZED	1	1181	IPR026728	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04255	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	122866	Lomi2g04255	Lomi6g00338
	324136	Lomi2g04255	Lomi1g00406
	333341	Lomi1g00406	Lomi2g04255

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	3854288	Lomi	Lomi1g00406	Lomi-Chr1:3683280	Lomi2g04255	Lomi-Chr2:47909334
	3887834	Lomi	Lomi2g04255	Lomi-Chr2:47909334	Lomi6g00338	Lomi-Chr6:3782537