Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04268 | ATGTCAATTATACGGCAAAACAAAAACACACAAAAAACTCTCAAACATGTTTTTCTTCTTCTTATTGTTGTTACATTTTCGCATTCACAATCCGTAACAGGTTCTTCAATTCACGATCTTCTAAAAAGCAAAGGGTTACCAGTTGGTTTGTTTCCAAAAGAAGTTGAATCATTCACTTTGTATGATACAGGTCTTCTAGAAGTTTTCTTAAGGGGCCCATGTTTAACGAAATTCGATACGATGGCGTTTTATGAAAGTACTGTTAGAGCTAATTTAACATATGGTAGTTTAACTGGTGTTGAAGGGCTATCACAAGAAGAATTGTTTTTATGGTTGCCGGTCAAAGATATCATCGTTGACGATCCTAAATCTGGGCTCATTTTGTTTGACATTGGATTAGCTCATAAACAGCTCTCACTTTCATTGTTTGAAGATCCACCTGATTGTAAATCTGAAGGTGCTATGATTTTGAAGAAGAAATCTAGAAAGGAGATCGGATTTGATGCTCAAATGTAG | 516 | 35.27 | MSIIRQNKNTQKTLKHVFLLLIVVTFSHSQSVTGSSIHDLLKSKGLPVGLFPKEVESFTLYDTGLLEVFLRGPCLTKFDTMAFYESTVRANLTYGSLTGVEGLSQEELFLWLPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPDCKSEGAMILKKKSRKEIGFDAQM | 171 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04268 | 171 | SUPERFAMILY | At5g01610-like | 15 | 151 | IPR036758 | - | |
| Lomi2g04268 | 171 | PANTHER | T31J12.3 PROTEIN-RELATED | 27 | 150 | IPR007493 | - | |
| Lomi2g04268 | 171 | FunFam | Uncharacterized protein At3g07460 | 24 | 153 | - | - | |
| Lomi2g04268 | 171 | Gene3D | - | 23 | 154 | IPR036758 | - | |
| Lomi2g04268 | 171 | Pfam | Protein of unknown function, DUF538 | 37 | 144 | IPR007493 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04268 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 122869 | Lomi2g04268 | Lomi4g02692 | |
| 324132 | Lomi2g04268 | Lomi1g00396 | |
| 333345 | Lomi1g00396 | Lomi2g04268 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3827805 | Lomi | Lomi2g04268 | Lomi-Chr2:48049616 | Lomi4g00538 | Lomi-Chr4:5885711 | |
| 3854280 | Lomi | Lomi1g00396 | Lomi-Chr1:3594095 | Lomi2g04268 | Lomi-Chr2:48049616 |