Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04276	ATGTTCACCAAATTCATGCTCCGGCCGCCACTATCTCCACCGCTCACACCTTTCTTATCTAAACCCCCCGTCTCCGTGTCCCTCCGCCGCATCTCCGTCGTCTCCGCCGCCGTTCCCCTCTCCGAAACCCTAACTTACGGTCCTTCATTATCCAAAGGCCACCATCCATATATCAAACCTAATTCACCACCACCACAACAACAACAACAACAACAAACCGAAAATAATGAAAATTCATCATTTGATGAAAATGAATTCACTCGTGAATTTGACATTTCTGCCCTTAGAGTCAATGCTGATCGATGTTACGCATTAGAAAGTCAACTCCGTGGTCATTTATTAAACTGGCCTAGGGTTAGGAACATTTCTAGGGTTTCATGTGACGAGATTGATCCGGAATTACAAAAGTATTTCAATTCGAGTGAGGACGAACCATTAGACGCTTTAAATCGAAGGATTTATGGAAAGGCGGAAGGAGATGGGGAGAAATTGAGTCCGGTTTTGTATAGAGATAAGCTTGTAAAAACTTTTAATTCTAGAGGTTTTGAAAAGTTTAGGAATTTGGCCAAGTTATCGAGGCCGAAAAGGAAGACAAAAACGAAAATGGAGACGAAAGAAGTGAAAGAGGGTAGAAGGAATGAGTCTTATATAATAGAAGAGGTTGTTGAGGATTATGGAAGTAATGATGAGAATTTGAGTGGGTTGATTGGAGATGAAGAGTATAGGTTGCGGAAATGGAAAGGATCAACGAGGTTGTTGCTTTTGGATGAACGGTATGCTTATAAGTCGCTAGATGAATTGCCTGAGGCAATTAAGGCATGCTCAACGGAATCATTATTTGAACTTGTGAGATGCAAGCTAACTTTGTTTTATAGTTACTGGCAGATGAATGAGGTCTTAGAGGCTTTGCTTCCAAAGGGTATGATTGTTCCTTCATCTTTTGAGACTGTTGGGCATATCATTCACCTCAATTTAAAAGATGAACATCTGCCCTATCAGAAACTTATAGCAAAGGTTGTTTTGGACAAAAACAAGCCAAAGATACAAACGGTGGTTAATAAGCTTGATGCCATCAATAACGAGTTTAGAACCATGCAGCTTGAAGTTTTGGCTGGCAATCATTCTCTTGTAACAAGGGTAGTAGAGAATGGACTCCATTTTCATGTTGATTTGGCAACAGTGTACTGGAGCTCAAAGTTGGGAACGGAGAGGCAAAGACTTTTGAATTGCTTTACACGGAGTGATGTCGTTTGTGATGTTTTTGCTGGGGTTGGTCCTTTGGCTATATCTGCCGCAAAAAAGGTTAAGCATGTGTATGCAAATGATTTAAATCCTCATGCAGTTGACTATCTGGAAAGAAATTCTGTACTCAACAAACTAGAAAGAAAGATTGAGGTTTTTAACATGGATGGGAGAAGATTCATTGATGCTATCTTTAAAAGTCAAAGCTCCCGACCCATCACACAAGTGGTCATGAATCTGCCCAAGGATGCAGCTGAGTTTCTTGATGCATTTAGAGGAATATTTAGACATACTGACGGAAATGAAGAGTTGACCTTGCCAAAGATTCATGTCTATGGATTCTCAAAAGCTGAAGATCCTGAGTTTGATTTCCATGAGAGGATAAGAATTGCATTGTCAGAGGTGGCCTTTGAGGTTAAAATGCACAAGGTACGTTTGGTCGCCCCTGGAAAATGGATGTTGTGTGCATCATTCGTTCTCCCTGAGAGAGTCGCGTTTGCCAATCCGATCTCAGAACTGTAA	1764	41.04	MFTKFMLRPPLSPPLTPFLSKPPVSVSLRRISVVSAAVPLSETLTYGPSLSKGHHPYIKPNSPPPQQQQQQQTENNENSSFDENEFTREFDISALRVNADRCYALESQLRGHLLNWPRVRNISRVSCDEIDPELQKYFNSSEDEPLDALNRRIYGKAEGDGEKLSPVLYRDKLVKTFNSRGFEKFRNLAKLSRPKRKTKTKMETKEVKEGRRNESYIIEEVVEDYGSNDENLSGLIGDEEYRLRKWKGSTRLLLLDERYAYKSLDELPEAIKACSTESLFELVRCKLTLFYSYWQMNEVLEALLPKGMIVPSSFETVGHIIHLNLKDEHLPYQKLIAKVVLDKNKPKIQTVVNKLDAINNEFRTMQLEVLAGNHSLVTRVVENGLHFHVDLATVYWSSKLGTERQRLLNCFTRSDVVCDVFAGVGPLAISAAKKVKHVYANDLNPHAVDYLERNSVLNKLERKIEVFNMDGRRFIDAIFKSQSSRPITQVVMNLPKDAAEFLDAFRGIFRHTDGNEELTLPKIHVYGFSKAEDPEFDFHERIRIALSEVAFEVKMHKVRLVAPGKWMLCASFVLPERVAFANPISEL	587

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04276	587	FunFam	tRNA (guanine(37)-N1)-methyltransferase	296	374	-	-
	Lomi2g04276	587	Hamap	tRNA (guanine(37)-N1)-methyltransferase [TRMT5].	78	576	IPR025792	GO:0030488(InterPro)\|GO:0052906(InterPro)
	Lomi2g04276	587	FunFam	tRNA (guanine(37)-N1)-methyltransferase	377	574	-	-
	Lomi2g04276	587	PANTHER	TRNA METHYLTRANSFERASE	88	580	-	GO:0002939(PANTHER)\|GO:0005737(PANTHER)\|GO:0008175(PANTHER)\|GO:0009019(PANTHER)\|GO:0030488(PANTHER)
	Lomi2g04276	587	ProSiteProfiles	SAM-dependent methyltransferase TRM5-TYW2-type domain profile.	314	576	IPR030382	-
	Lomi2g04276	587	MobiDBLite	consensus disorder prediction	64	80	-	-
	Lomi2g04276	587	Pfam	Met-10+ like-protein	313	510	IPR030382	-
	Lomi2g04276	587	CDD	AdoMet-MTases	417	481	-	-
	Lomi2g04276	587	Gene3D	-	295	373	-	-
	Lomi2g04276	587	Gene3D	Vaccinia Virus protein VP39	377	574	IPR029063	-
	Lomi2g04276	587	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	310	576	IPR029063	-
	Lomi2g04276	587	MobiDBLite	consensus disorder prediction	49	82	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04276	K15429	tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr2:48229168	Lomi4g01822	Lomi-Chr4:26069890	dispersed