Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04281 | ATGGGCTTGTCTCTAAAACTCGCTTTCGTTTCCACCACCGTCATGTCCACCGCCGTCATGCTAAAGCTTTTAACACCTATCACTACGGATCTCACAACCTCTGATTTTGCTACAATATGGACAGCCTTAATCTCATGGCTCAGACCGCCTTACCTTTACGTTGTCATCAATTGTATCATCATCACTATCGTCGCATCTACGCGCTTACAATCGAAACTTGAAACTTCTCATTTGATATCAACTTTCCCGAACCCGGCTGAACCGGTCAACGTTGTACTTCCTGTTGAACTACCGCATGCACATCATGAACCGGAAATACCATTTCATGAGTATGTTCATGTTCCTGAACCGGTGAAGTTGGTTAAAGTTGCGGAACCGGATTTGGGTATTAATGATGACTTTATTAGTGATGAAAAAAGGGATGAAGAACTAAAGAAAAATAGTAGGGCTGATAAAAAGTCGGTCATATCGATGTCAGCGTCGAAAACGAATGAAGTTGATTTATCTAATTTTTCGATGGACAAACCACCGGCTTCCGCCAGATTCAGCCACCGTAAACCGTCCAAATCCACCAATGAAGGTGGAAGAACGTTGGGTGTTGCAAAACCTAAGAGGCAAGACACGCTGGAAACCACGTGGAAGACAATAACCGAGGGTCGGTCGGTGCCAATAAATCGCCACCTCCGAAAATCCGACACGTTGGAGACCCACGGGAACAGCCGTCAAAATCGCAAAGCCGAAGACTTACCGACCGATCATCATTCCAAAAGAATGACAAAATCCGACACGTTTGATGTCAACCGCGGCAGAGGCAGTGACAGAAAACCACCGCCTCTGCCGTCGAAACTGAACCGCTTTGATGGCTCGGGGAGGTTGAAAAAAGAACCTTCGTTAGGACAAGAGGAATTGAATCGAAGAGTGGAAGCGTTTATTAAGAAGTTTAATGAAGATATGAGATTACAAAGACAAGAATCGTTGAATCGATACATGGAGATGATTAACCGTGGGGCCCATTAA | 1017 | 44.94 | MGLSLKLAFVSTTVMSTAVMLKLLTPITTDLTTSDFATIWTALISWLRPPYLYVVINCIIITIVASTRLQSKLETSHLISTFPNPAEPVNVVLPVELPHAHHEPEIPFHEYVHVPEPVKLVKVAEPDLGINDDFISDEKRDEELKKNSRADKKSVISMSASKTNEVDLSNFSMDKPPASARFSHRKPSKSTNEGGRTLGVAKPKRQDTLETTWKTITEGRSVPINRHLRKSDTLETHGNSRQNRKAEDLPTDHHSKRMTKSDTFDVNRGRGSDRKPPPLPSKLNRFDGSGRLKKEPSLGQEELNRRVEAFIKKFNEDMRLQRQESLNRYMEMINRGAH | 338 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04281 | 338 | Pfam | Cotton fibre expressed protein | 300 | 335 | IPR008480 | - | |
| Lomi2g04281 | 338 | PANTHER | COTTON FIBER (DUF761) | 29 | 336 | - | - | |
| Lomi2g04281 | 338 | MobiDBLite | consensus disorder prediction | 167 | 300 | - | - | |
| Lomi2g04281 | 338 | Pfam | Domain of unknown function (DUF4408) | 39 | 69 | IPR025520 | - | |
| Lomi2g04281 | 338 | MobiDBLite | consensus disorder prediction | 223 | 272 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04281 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 324128 | Lomi2g04281 | Lomi1g00376 | |
| 333349 | Lomi1g00376 | Lomi2g04281 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr10:26908677 | Lomi2g04281 | Lomi-Chr2:48280124 | dispersed | |
| Lomi | Lomi-Chr2:48280124 | Lomi8g02024 | Lomi-Chr8:26453239 | dispersed | |
| Lomi | Lomi-Chr1:3365963 | Lomi2g04281 | Lomi-Chr2:48280124 | wgd | |
| Lomi | Lomi-Chr1:36601016 | Lomi2g04281 | Lomi-Chr2:48280124 | wgd | |
| Lomi | Lomi-Chr2:17641467 | Lomi2g04281 | Lomi-Chr2:48280124 | wgd |