Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04295	ATGGCTCTACAAGCTACCTCTTTCACCATTAACAATCTGCAAGGAAAGATCATTTTATCTTCCAAGGATTCATCCCTCTTTGGTGTCTCATTTTCAAAAGTTGATCATATTACTTCGACTGTGTTGAAAAGCAAGATGGAATTCAGCCAAAGAAAAGTGTTCAAAGTTCAAGCAGTAGCCACAACAACGCCGGATGTGACCCGTGCAGTACCCACTGGGAAGAAAACATTGCGAAAAGGCAGTGTCATCATCACTGGAGCTTCCTCCGGTTTGGGTCTAGCCACGGCTAAATCCTTAGCAGAAACTGGGAAATGGCACGTGATTATGGCATGTAGAGACTTTCTAAAAGCTGAAAGAGCAGCAAAATCAGCTGGTATGTCAAAAGAAAACTACACAGTGATGCACTTAGACCTTGCATCATTAGATAGTGTTCGCCAATTCGTTGCTAATTTCAAGCAATTGGGTAGACCACTCGACGTTTTGGTATGCAATGCAGCCGTGTACCAACCAAGGGCTAAAGAACCAACCTTTACAGCCGATGGAATCGAGCTTAGTGTTGGAATAAATCATCTTGGTCACTTTCTTCTTTCAAGATTGTTGCTTGATGACATGAAACAATCTGATTACCCATCAAAAAGGCTCATAATCGTTGGTTCAATTACTGGAAACACTAACACTCTGGCTGGAAATGTACCTCCAAAAGCTAACTTAGGTGACATGAGGGGTTTAGCTGGTGGTTTAAATGGTGTAAATAGTTCAACCATGATTGATGGAGGCAATTTTGATGGTGCGAAAGCGTATAAAGATAGCAAGATCTGTAACATGCTCACAATGCAAGAGTTTCATAGGAGATATCATGAAGAAACTGGAATTACATTTGCTTCTTTGTATCCCGGTTGCATTGCCAACACGGGGTTGTTTAGGGAACACCTTCCCGCATTTAGATTGTTGTTTCCTCCATTCCAAAAATTTATCACCAAAGGGTTTGTCTCTGAAGATGAATCCGGCAAGCGACTTGCGCAGGTTGTGAGTGATCCGAGCTTAACAAAGTCAGGGGTGTACTGGAGCTGGAACAAGGATTCGGCTTCATTTGAGAACCAGTTGTCGGAAGAAGCAAGTGATGTGAGCAAGGCGCGTAAGGTGTGGGACATAAGCGAGAAGCTTGTGGGTTTGGCTTGA	1179	43.0	MALQATSFTINNLQGKIILSSKDSSLFGVSFSKVDHITSTVLKSKMEFSQRKVFKVQAVATTTPDVTRAVPTGKKTLRKGSVIITGASSGLGLATAKSLAETGKWHVIMACRDFLKAERAAKSAGMSKENYTVMHLDLASLDSVRQFVANFKQLGRPLDVLVCNAAVYQPRAKEPTFTADGIELSVGINHLGHFLLSRLLLDDMKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDMRGLAGGLNGVNSSTMIDGGNFDGAKAYKDSKICNMLTMQEFHRRYHEETGITFASLYPGCIANTGLFREHLPAFRLLFPPFQKFITKGFVSEDESGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSEEASDVSKARKVWDISEKLVGLA	392

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04295	392	PANTHER	PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC	1	392	IPR005979	GO:0016630(InterPro)
	Lomi2g04295	392	CDD	LPOR-like-SDR-c-like	79	391	-	-
	Lomi2g04295	392	NCBIfam	protochlorophyllide reductase	78	392	IPR005979	GO:0016630(InterPro)
	Lomi2g04295	392	Gene3D	-	72	392	-	-
	Lomi2g04295	392	Pfam	short chain dehydrogenase	82	225	IPR002347	-
	Lomi2g04295	392	PRINTS	Glucose-ribitol dehydrogenase family signature	81	98	IPR002347	-
	Lomi2g04295	392	PRINTS	Glucose-ribitol dehydrogenase family signature	289	306	IPR002347	-
	Lomi2g04295	392	PRINTS	Glucose-ribitol dehydrogenase family signature	156	167	IPR002347	-
	Lomi2g04295	392	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	77	360	IPR036291	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04295	K00218	protochlorophyllide reductase [EC:1.3.1.33]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	122878	Lomi2g04295	Lomi6g00317
	122879	Lomi2g04295	Lomi7g00295

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr2:48392820	Lomi6g01382	Lomi-Chr6:16021034	dispersed
	Lomi	Lomi-Chr2:48392820	Lomi2g04296	Lomi-Chr2:48397062	tandem
	Lomi	Lomi-Chr12:27328163	Lomi2g04295	Lomi-Chr2:48392820	transposed
	Lomi	Lomi-Chr2:48392820	Lomi6g00317	Lomi-Chr6:3493591	wgd
	Lomi	Lomi-Chr2:48392820	Lomi7g00295	Lomi-Chr7:2935237	wgd