Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04301	ATGGCCGGCGTTCTCGAAAACCTAACCGTTCCTAGGACCTCTGTATTTCCGGCAGCCTCTCTAACTCCGATCGCCTCTTCTCACATCTCTCAACTGTCACTTCGCCGGAACTTTGCACAGGAATCTAGAAGCTCAAAATTGAATACTGATCCCTTCCGTTCTTCTGGATCCGTGAAATTGAGATCGAAATTCGGTCGTCGTGGTGGACGAATCGTTTGCGAAGCTCAGGAAACAGCCGTTCCAGTACTTCCTGTCACCGATGGAACATGGCAATCACTTGTTCTTGACTCTCAACTTCCTGTACTGGTTGAATTTTGGGCTCCGTGGTGTGGGCCATGTCGCATGATCCACCCTGTCATTGATGAGCTCGCAAAAGAATACGCAGGCAAGCTCACTTGTTACAAGGTAAATACTGATGAAAGTCCTTCAATCGCAACCAAATATGGTATAAGAAGCATCCCCACTGTCATCATCTTTAAAGATGGAGAGAAGAAAGATGCAGTTATTGGTGCAGTTCCAAGACCAACTCTGTGTACCTGCATTGAGAAGTTCTTGTAG	558	46.77	MAGVLENLTVPRTSVFPAASLTPIASSHISQLSLRRNFAQESRSSKLNTDPFRSSGSVKLRSKFGRRGGRIVCEAQETAVPVLPVTDGTWQSLVLDSQLPVLVEFWAPWCGPCRMIHPVIDELAKEYAGKLTCYKVNTDESPSIATKYGIRSIPTVIIFKDGEKKDAVIGAVPRPTLCTCIEKFL	185

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04301	185	CDD	TRX-family	89	177	-	-
	Lomi2g04301	185	PRINTS	Thioredoxin family signature	101	109	-	-
	Lomi2g04301	185	PRINTS	Thioredoxin family signature	109	118	-	-
	Lomi2g04301	185	PRINTS	Thioredoxin family signature	149	160	-	-
	Lomi2g04301	185	SUPERFAMILY	Thioredoxin-like	73	185	IPR036249	-
	Lomi2g04301	185	PANTHER	GEO12009P1	57	185	-	GO:0005737(PANTHER)\|GO:0015035(PANTHER)
	Lomi2g04301	185	Pfam	Thioredoxin	82	182	IPR013766	-
	Lomi2g04301	185	ProSitePatterns	Thioredoxin family active site.	102	120	IPR017937	-
	Lomi2g04301	185	ProSiteProfiles	Thioredoxin domain profile.	72	185	IPR013766	-
	Lomi2g04301	185	NCBIfam	thioredoxin	86	184	IPR005746	GO:0015035(InterPro)
	Lomi2g04301	185	Gene3D	Glutaredoxin	82	185	-	-
	Lomi2g04301	185	FunFam	Thioredoxin	76	185	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04301	K03671	thioredoxin

Event-related genes

Select	Gene_1	Gene_2	Event_name
	122881	Lomi2g04301	Lomi5g02052

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:676667	Lomi2g04301	Lomi-Chr2:48428940	dispersed
	Lomi	Lomi-Chr2:48428940	Lomi6g02019	Lomi-Chr6:28376583	dispersed
	Lomi	Lomi-Chr2:48428940	Lomi5g02052	Lomi-Chr5:31398794	wgd