AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04311 ATGTCAATATTACCGAGATCTTTTCGCAGTCATTTCTTCAAACACTTGCCGTGCACTTCCTTTTCATCCATACGTACCACTCCAGTTTTTACTCATGTTTCTACTTTTAAGTTAACTAATTCCACTAGGTATCGCCCATCAAGAAAGCTGAAAGATTTCTTGAATTTGAGTTCAATTACTGCATCGTTGTCTACATCTTGCTCCGCTTCTAAAACTTCAACAACTGGTTCATATCTATCTGTAGACATACAATGTCATCCAGATTTGGCTGATATGCTATCAGAAGCACTTCTATGTTTCGGTGCTGTTTCAACAAGTATGGTTGAACCAGACAGTTCTACCTCTAAGAATGAGGTTTCGATTGGTTCAATATTTACTGTATCTCATGATGTGCATCAGAGTATTGCATTGGCAGCTGATTCAATAGGCTTAAAAGAAACACCTGTTTATAAACTCACAACGGGTTACCAGTCCGATTGGATCGATAATGCACGGGAATCTTTTCAACCCGTGGAAGTTATGGAAGGCCTTTGGATTGTACCTGAGTGGATAACTCCCCCGGAAACTGAAGCAACAATTATAAGTCTAAATCCCGGTATAGCCTTTGGAACTGGAGACCACCCGACTACCAAATTATGTCTGTTGTTACTACACGGTTTAATCAAAGGTGGCGAAACGGTTTTGGATTATGGCACAGGTTCAGGGATTCTCGCAATTGCAGCACTAAAGTTTGGTGCAGCCTCATCAGTTGGGTTCGATATAGACCCTCAAGCAATATCAGCTGCGCGTCATAATGCTGCATTGAACAACATAGGACCCGAGATGTTGCAATTGCAGATTGTTCCTAGTAACATCAATCCTACGTCAACAGGCCAATGGCAATTGACTTTGAAGGATAACAATGTAGAAGAGAAGGATTTAAAGGATCTGGACATCATTGCTAAAAAGGATAATTATGATGTCGTTATTGCAAACATTCTTTTGAACCCATTGTTAGATTTGGCCGATCATATTGTTTCTTATGCTAAGCCTGGTGGTGTAGTTGGTTTGTCTGGTATCATCTTGGAACAGGTACCAACTGTTGTAGATCGATACTCGAGTCTTTTGGAAGGCATCACTGTGTCGGAAATTGATGATTGGGCTTGCATAAGTGGTACAAAGAGGAAGATAGCTAGCTGA 1179 40.71 MSILPRSFRSHFFKHLPCTSFSSIRTTPVFTHVSTFKLTNSTRYRPSRKLKDFLNLSSITASLSTSCSASKTSTTGSYLSVDIQCHPDLADMLSEALLCFGAVSTSMVEPDSSTSKNEVSIGSIFTVSHDVHQSIALAADSIGLKETPVYKLTTGYQSDWIDNARESFQPVEVMEGLWIVPEWITPPETEATIISLNPGIAFGTGDHPTTKLCLLLLHGLIKGGETVLDYGTGSGILAIAALKFGAASSVGFDIDPQAISAARHNAALNNIGPEMLQLQIVPSNINPTSTGQWQLTLKDNNVEEKDLKDLDIIAKKDNYDVVIANILLNPLLDLADHIVSYAKPGGVVGLSGIILEQVPTVVDRYSSLLEGITVSEIDDWACISGTKRKIAS 392
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04311 392 CDD AdoMet-MTases 226 348 - -
Lomi2g04311 392 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 383 IPR029063 -
Lomi2g04311 392 Gene3D Vaccinia Virus protein VP39 167 391 IPR029063 -
Lomi2g04311 392 Hamap Ribosomal protein L11 methyltransferase [prmA]. 76 387 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Lomi2g04311 392 Pfam Ribosomal protein L11 methyltransferase (PrmA) 78 387 - -
Lomi2g04311 392 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 78 388 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04311 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]