Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04313 | ATGGGTCGGGTATTTCTGGTGGAATTAGAAGGAAGGACTTACAAATGCAGATTTTGCAAAACAGATTTAGCTCTTGCTGAAAATGTTGTCTCCCGGGGGTTTCATTGTAGAAGAGGAAAAGCTTACCTGTTTAGCAATGTGGTGAACATCACAGCTGGACCTATTGAAGAGAGGATGATGCTATCTGGATTGCACACCGTTACAGATATATATTGTGTATGCTGTGGACAAATTGTTGGCTGGAAATATGAGACCGCACATGAGCAATCCCAGAAGTATAAAGAAGGCAAATTTGTTCTTGAGAGAGGAAGAATAATTGATGGACTTGATTCAGAATTTTACATAGATACCCGTCCGAGTTCAAGTGATGCTGAAGAAGCCTAA | 384 | 40.62 | MGRVFLVELEGRTYKCRFCKTDLALAENVVSRGFHCRRGKAYLFSNVVNITAGPIEERMMLSGLHTVTDIYCVCCGQIVGWKYETAHEQSQKYKEGKFVLERGRIIDGLDSEFYIDTRPSSSDAEEA | 127 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04313 | 127 | PANTHER | PROTEIN YIPPEE-LIKE CG15309-RELATED | 1 | 106 | IPR039058 | - | |
| Lomi2g04313 | 127 | ProSiteProfiles | Yippee domain profile. | 12 | 109 | IPR034751 | - | |
| Lomi2g04313 | 127 | Pfam | Yippee zinc-binding-DNA-binding -Mis18, centromere assembly | 14 | 105 | IPR004910 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04313 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 324113 | Lomi2g04313 | Lomi1g00346 | |
| 333364 | Lomi1g00346 | Lomi2g04313 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr2:48536288 | Lomi4g00050 | Lomi-Chr4:532397 | dispersed | |
| Lomi | Lomi-Chr1:3044810 | Lomi2g04313 | Lomi-Chr2:48536288 | wgd |