AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04327 ATGGCTCATGAAGAACAAAATAGGGGTGCAAAATTGTCAAAACAGTTGAAAGTACCACAAAGGGGTATGGGTGTGGCTCAACTTGAGAAGATTATATTAGAAGAAAAAGTTATGAAAGATGTTTCTGTTTTACCATTTAATCCCAAAAGTTTTAGGCCTAGTCTGGCGTTTCCTTTACCGCCTGATTGCCGTCATCTGGTCATGAATACAGATGCTATAAGTATGAATCATGGTTTTCTGTCTATGCCAAATCATCAGAATCGGGACCGTGTGCCTATGAATCTAGGTGGTTTGACTTATGAATCCAACACACATGTTTTCCCATTGTTGCCTAATGTAACACAAAGATTACATTTTCAGCAATCATGTTCTTCATCAATGATGAATTTTCAAATGGAGCCCCCTTTAAACCAAAGCTATTGTAGCAAAAAATATTCATCAGTTTGGCCAGAGATGGTTGGCATGAAGAGATCATATCCTTTTTCCACAGAAAATATGCCAATACCTTCTTTCAAGTGCAAATTCCCTCCTGCTTATGCCGCTTCAATATCAAGATCGGATGAATCAACTTCTTGTAGCAATATAAGCAGTGGAACTGTTACTTTAGAGCCTCCAAATAAAGTTTTCAGAGAAAGCTCTTTAAGCTTAGGTGTCAAAACGGGTCAAATGACAAAGAAACTTATGGATGAAGATCGCGGTCTCACCAAAGACTTTCTCACATTGGCTCCACCTAAAGCTTCACCTCAATCGCATTCGAGTTCAGATGAGGATTTTTCACCTTATCAAGGTGAAACAAGTGATTCATGTGAAATAGAATGTTCAAGCCAACAGCAGACATTTCATACTTTCTTTCCAGGTGCAAGGATAAACATCAATGGTGAATCAGGGGAACAAGTTGATCTCAGTTTGAAGCTATAG 918 38.56 MAHEEQNRGAKLSKQLKVPQRGMGVAQLEKIILEEKVMKDVSVLPFNPKSFRPSLAFPLPPDCRHLVMNTDAISMNHGFLSMPNHQNRDRVPMNLGGLTYESNTHVFPLLPNVTQRLHFQQSCSSSMMNFQMEPPLNQSYCSKKYSSVWPEMVGMKRSYPFSTENMPIPSFKCKFPPAYAASISRSDESTSCSNISSGTVTLEPPNKVFRESSLSLGVKTGQMTKKLMDEDRGLTKDFLTLAPPKASPQSHSSSDEDFSPYQGETSDSCEIECSSQQQTFHTFFPGARININGESGEQVDLSLKL 305
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04327 305 MobiDBLite consensus disorder prediction 240 269 - -
Lomi2g04327 305 MobiDBLite consensus disorder prediction 245 269 - -
Lomi2g04327 305 PANTHER OS01G0212500 PROTEIN 7 305 IPR040356 GO:0003700(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04327 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
122901 Lomi2g04327 Lomi3g00707
122902 Lomi2g04327 Lomi4g02664
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr2:48662779 Lomi3g00707 Lomi-Chr3:5794946 wgd
Lomi Lomi-Chr2:48662779 Lomi4g02664 Lomi-Chr4:33949507 wgd