AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04358 ATGTCTGGGAGGAATCGTGGACCTCCGGTCCCAATGAAAGGTGCACCACATGGAGGAATGCCGCCTGTTCACGAGCCTCCGTTTGGAAGGAACCGAGGTCCAATGCCGATGCCTCATCCTGTGCTGCTTGAAGAAATGAGGGAAGCTCAGTTTGGGATGGGTGGACCGCATAGTCACAGACAACTGCCTCCACACCCTGCGATAATTGAGGAGCGGTTAGCAGCTCAACATCAGGATATTCAGGGGCTATTGATTGATAATCAGCGTTTAGCTGCAACTCATGTTGCACTAAAGCAGGAATTGGAGGCTGCACAACATGAGCTTCAACAAACAGATCACTTTGCTCGTAACTTTCTCATGGAGAAGGATATGCAAATGAGAGAGATGTATGACAAGTCGGCTAAAATGGAACATGATCTTCATGGGATGGAAGGCATGCGAGCTGAGCTTATGCAATTGCATGCTGATATTACCGAGTTGACGGCTATACGTCAAAAACTTACTGCTCAGGTTCAGGCGATGACCCAAGATCTTGCTAGAGCTAATGCAGATTTGCAGCAAGTTCCTGCACTCAAGTCAGAAATTGGAGGGCTTAGACAGGAATTGCAACGTCTGAGGGCTGCAATTGAACATGAGAAGAAGGGGCATGCAGATAACTATGAGCATGGTCAAGTGATGGAGAAGAATTTACTCTCTATGGCTCGAGAGCTAGAAAAGTTACGCGCCGAGATGGCTAATGCTGAAAAAAGGGCTCGTGCTGCTGCAGCAGCAGGGAATCCAAATCCAGGATATAACACAAATTATGGCAATGTTGAAGCTAACTATGCGGGGAATCCTTACCCTCCTAATTACGGCATGGGTTCTACGAATCAAATAAATCCTCCTGGTGCAGAAGGTTATCCTCAGTATGGACCTGGACCTGGATCTTGGGGCTCGTATGATATGCAACGGGCTCAAGGACACAGATAG 969 47.78 MSGRNRGPPVPMKGAPHGGMPPVHEPPFGRNRGPMPMPHPVLLEEMREAQFGMGGPHSHRQLPPHPAIIEERLAAQHQDIQGLLIDNQRLAATHVALKQELEAAQHELQQTDHFARNFLMEKDMQMREMYDKSAKMEHDLHGMEGMRAELMQLHADITELTAIRQKLTAQVQAMTQDLARANADLQQVPALKSEIGGLRQELQRLRAAIEHEKKGHADNYEHGQVMEKNLLSMARELEKLRAEMANAEKRARAAAAAGNPNPGYNTNYGNVEANYAGNPYPPNYGMGSTNQINPPGAEGYPQYGPGPGSWGSYDMQRAQGHR 322
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04358 322 MobiDBLite consensus disorder prediction 14 32 - -
Lomi2g04358 322 Coils Coil 223 257 - -
Lomi2g04358 322 PANTHER PROTEIN FLX-LIKE 2 1 293 IPR040353 -
Lomi2g04358 322 MobiDBLite consensus disorder prediction 1 32 - -
Lomi2g04358 322 Coils Coil 87 107 - -
Lomi2g04358 322 Coils Coil 157 184 - -
Lomi2g04358 322 MobiDBLite consensus disorder prediction 286 322 - -
Lomi2g04358 322 Coils Coil 188 208 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04358 K27811 protein FLX/FLXL
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Event-related genes

Select Gene_1 Gene_2 Event_name
324087 Lomi2g04358 Lomi1g00300
333390 Lomi1g00300 Lomi2g04358
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr2:48920848 Lomi4g00629 Lomi-Chr4:6983815 dispersed
Lomi Lomi-Chr1:2575033 Lomi2g04358 Lomi-Chr2:48920848 wgd