AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04365 ATGGCTTCCTTGATCCAAGAAAATTGGTCAACCATAAATGAATTACAAGATAATTTTGACGATTTCGAGTCCTTAGAAATCGATGAGACTCTTTTGAGGTCGATACTCGATGAAACACACGTAGAAGACGAGTGTGACAATGAGAAATTATCAAGCGTTATCCGGTCTTTAGAAGCCGAGATTAATCCAATTGTTATCGACGATAATGACATGAGTTTGGAACTTGAATGGAATAACGAATGGGAAAGTTATCATCAATTTTCGACCAATCAAAATTATTCGAAATCGCAAGATGTTGAATATAATTGGATGGAGATGGATGAGATGTACATGATCCAAAGTTTTGAAGATGGAATGGGTGGTATAATAGAGTTTGATGGTGTCAAAGATTATTCCCAAATTTCTTATGGAAATAACATTGAGGAGCAAAGCTATGGTGCTTTATGGCAAGAAATAAATTGA 462 35.28 MASLIQENWSTINELQDNFDDFESLEIDETLLRSILDETHVEDECDNEKLSSVIRSLEAEINPIVIDDNDMSLELEWNNEWESYHQFSTNQNYSKSQDVEYNWMEMDEMYMIQSFEDGMGGIIEFDGVKDYSQISYGNNIEEQSYGALWQEIN 153
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04365 153 PANTHER VIRUS-SPECIFIC-SIGNALING-PATHWAY REGULATED PROTEIN-RELATED 1 151 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04365 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
324085 Lomi2g04365 Lomi1g00292
333392 Lomi1g00292 Lomi2g04365
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:2525252 Lomi2g04365 Lomi-Chr2:48977676 wgd