Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04369	ATGTCTTCTTCACTACTTCCACTTACATCCACATTCACTTCTTTTAACTCTACCAATTCACGATTCAACCCCTCAAAGATCCAAACCAACCGAAACGGGTTCAAAGTCTCATGCAATGCTACACCACCAAATGACGATAACGAAAACCAACTCATACTCCCGGAATCACAAAAACTAATCCTCCCAAATAACAATTTAGACCGAAGAAACCTACTCGTTGGGCTCGGTGGCCTTTACACGGCCGCCAACTTAACAGCCTTACCTTCAGCATTCGCTACTCCTATAACATCTCCCGATATCACATCCATTTGTAAGGATGCGCAATCGGGGATCAGGAACGTCGAAGGTGCCGTAAGGACAAGAAAATGTTGTCCTCCCGCTTTAGGAAAGACTGTTAAACCTTTCGTCTTTCCTAACAGAAGCGAAAAGGTCAGAATGAGATGGCCCGCGCATAAAGGGACTAAAGAGCAAGTCGAAAAATACAAACGAGCCATTCAAGCCATGCGAAATCTCCCAGACGATCACCCGCATAGTTTCGCTAGCCAAGCGAAGATTCATTGCGCTTACTGTAACGGTGGTTACACACAAGTCGATAGCGGTTTCCCCGATATCGAAATTCAGATTCACAACTCGTGGCTATTCTTTCCGTTCCATCGTTGGTACCTTTTCTTCTACGAAAGAATACTCGGAAAGTTGATTAACGATCCGACATTCGCGTTACCTTACTGGAACTGGGACGACCCCGCTGGAATGACGATTCCCGAAATTCTGGCATCGAAAGATAACAACAACCCGTTGTATGACGTGTACCGTGACGCACGTCATCAACCACCAAATATACTCGATCTAGCTTTCGATGGCAGCGAACGTGACACCACAAGTGAAATACAAAAACAATGCAATCTGTATACCGTGTACCGTGATTTAGTACGTAACGGAACTGATACGACGAGCTTTTTCGGAGGCGAATACGTAGCTGGAAATGCTATTCCTGGTAGCAAAGGTTCTACAATTTCGGTTGGATCCGTAGAAGCTGGTTCGCATACTGCGGTTCATAGATGGGTTGGTGACACAAAACAACCTAATGGTGAAGACATGGGTAACTTCTATTCGGCCGGGTACGACCCGGTGTTTTACGTCCACCACGCGAATGTCGATCGTATGTGGAAACTATGGAAGGAATTAGACATTCCTGGACACGTGGAACCGACTAACCCAGATTGGTTAAACGCGTCGTATGTGTTCTACGATGAGAATCAGGATCTCGTACGTGTTTACAACAAAGACACGGTCAATCTAGACAAGCTCAAGTACAATTTTATTGAAAAGTCAAAATCGGAAGTCCTTCCATGGCGAAAAAGTCGGCCAGCAAAACGTGGCAGAAAGTTGAGACCAAAGAAGCCCGAAGAAATCAAAACAGTGGACAAAGTGCGGTTCCCGGTTGGTGTGGAACCGCTTTTGAAGGTGAAAGTGAAACGGCCAGCGGTTAATAGGACAGAGGCTCAAAAGGCGAAAGCGAATGAGGTTTTGTTGATAGATGGGATTAGGTTTAACAGTGAGAAGTTTGTTAAGTTTGATGTGTTTGTGAATGACAACGTTGAAGAAGGTGGTGAAGTGACAACACCGTGTGATCCGGAGTACGCGGGTGGGTTTTCGCAGGTCCCGCATAGTGATATGAAGAGAATGTTGATGTCGAGTGCTGCGAGGTTCGGGTTAAACGAGTTGTTGGAGGATACGAAAACCGAAGACGAAGAGTATGCGACGGTGACTTTGGTTGCGAGGACTGGGTGCGAGGATCTTACTATTTCGGGTATCAAGATCGTGTTGGTTCCTATTGTTTAA	1842	45.77	MSSSLLPLTSTFTSFNSTNSRFNPSKIQTNRNGFKVSCNATPPNDDNENQLILPESQKLILPNNNLDRRNLLVGLGGLYTAANLTALPSAFATPITSPDITSICKDAQSGIRNVEGAVRTRKCCPPALGKTVKPFVFPNRSEKVRMRWPAHKGTKEQVEKYKRAIQAMRNLPDDHPHSFASQAKIHCAYCNGGYTQVDSGFPDIEIQIHNSWLFFPFHRWYLFFYERILGKLINDPTFALPYWNWDDPAGMTIPEILASKDNNNPLYDVYRDARHQPPNILDLAFDGSERDTTSEIQKQCNLYTVYRDLVRNGTDTTSFFGGEYVAGNAIPGSKGSTISVGSVEAGSHTAVHRWVGDTKQPNGEDMGNFYSAGYDPVFYVHHANVDRMWKLWKELDIPGHVEPTNPDWLNASYVFYDENQDLVRVYNKDTVNLDKLKYNFIEKSKSEVLPWRKSRPAKRGRKLRPKKPEEIKTVDKVRFPVGVEPLLKVKVKRPAVNRTEAQKAKANEVLLIDGIRFNSEKFVKFDVFVNDNVEEGGEVTTPCDPEYAGGFSQVPHSDMKRMLMSSAARFGLNELLEDTKTEDEEYATVTLVARTGCEDLTISGIKIVLVPIV	613

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04369	613	PIRSF	PPO-plant	1	610	IPR016213	GO:0004097(InterPro)\|GO:0046148(InterPro)
	Lomi2g04369	613	ProSitePatterns	Tyrosinase and hemocyanins CuB-binding region signature.	375	386	IPR002227	GO:0016491(InterPro)
	Lomi2g04369	613	Pfam	Common central domain of tyrosinase	177	394	IPR002227	GO:0016491(InterPro)
	Lomi2g04369	613	SUPERFAMILY	Di-copper centre-containing domain	119	439	IPR008922	-
	Lomi2g04369	613	PANTHER	TYROSINASE FAMILY MEMBER	67	577	IPR050316	-
	Lomi2g04369	613	Coils	Coil	151	171	-	-
	Lomi2g04369	613	Gene3D	-	93	445	IPR008922	-
	Lomi2g04369	613	PRINTS	Tyrosinase copper-binding domain signature	209	226	IPR002227	GO:0016491(InterPro)
	Lomi2g04369	613	PRINTS	Tyrosinase copper-binding domain signature	374	392	IPR002227	GO:0016491(InterPro)
	Lomi2g04369	613	PRINTS	Tyrosinase copper-binding domain signature	240	245	IPR002227	GO:0016491(InterPro)
	Lomi2g04369	613	PRINTS	Tyrosinase copper-binding domain signature	347	358	IPR002227	GO:0016491(InterPro)
	Lomi2g04369	613	Pfam	Protein of unknown function (DUF-B2219)	479	608	IPR022740	GO:0004097(InterPro)
	Lomi2g04369	613	Pfam	Polyphenol oxidase middle domain	403	456	IPR022739	GO:0004097(InterPro)
	Lomi2g04369	613	ProSitePatterns	Tyrosinase CuA-binding region signature.	209	226	IPR002227	GO:0016491(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04369	K00422	polyphenol oxidase [EC:1.10.3.1]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	122929	Lomi2g04369	Lomi5g02128
	324082	Lomi2g04369	Lomi1g00286
	333395	Lomi1g00286	Lomi2g04369

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:2440034	Lomi2g04369	Lomi-Chr2:49045002	dispersed
	Lomi	Lomi-Chr1:2462412	Lomi2g04369	Lomi-Chr2:49045002	dispersed
	Lomi	Lomi-Chr2:49045002	Lomi3g00824	Lomi-Chr3:6703642	dispersed
	Lomi	Lomi-Chr2:49038203	Lomi2g04369	Lomi-Chr2:49045002	tandem