Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04376 | ATGGGGAGAAAACGTGAACGAATTCAAAATCCTCAACCTTTTTTAGCCGATGACACCAACAAATCTGCCTCCAAAAAACGCACCAAAAAACCGGCTAAACAACATCAACTTGAAGAAACGCTTATATCTGAAGGAATGAGTTCGAAGATATTGAAGGAAGCTTTAATTCAACAAAAGGAGATTCAGGAAGAAACAGATGCTGAAAACCCTAATAACATTGTTTTCCCTGAAGAACCTGTTACTCAAGCCCAAGCTGACGATGACGATGACGATGTTGATAATTTTGCTGGTTTTTCTGACAATCATAGTCAGTTTGGTGGTTATGAGGAAGAAATTAACGAGGATGAAGAGAAGTTACTGGAAGCTTTCTTTTCCAGGGATGCACGACCACAACGAACTTTAGCTGACATCATTGTGGAGAAGATCAAAGAAAAAGATCAATTGCCTTCAGGTTTATCTGCAGGAACTCAACCCGTGCCAAAGTTGGATGATTCCATCATAGAAATATACAAGAGTGTTGGAGAAATTTTCAAGAAGTATACTTCAGGAAAATTGCCATTAGCCTTTAAAAGCATACCCGCCAAGCAACACTGGGAAGAACTTCTGTACTTGACAGAACCAGAAAAATGGTCGCCTAATGCAGTGTACCAAGCCACCAGAATACTTGCTTCAAATATGAGTTCAAAGAAAGTGGAGAGGTTTTACAAATTCATTTTACTCCCTCGTATTAGACAAGATATAAGGAAGAACAAAAAACTCCATTTTGCATTGTATCAAGCTTTGAAAAAGGCTGTATATAAACCAGCTGCCTTCAATAAAGGAATCTTGTTTCCGCTATGTGAGTCAAGGACTTGCAATTTAAGAGAGGCAGTTATTATTGGAAGCATCCTTCAAAAAGTATCTATTCCGCCACTTCATTCCAGTCTTGCGTTAATGAAACTTGCGGAAATGGAGTATGGTGGCACGACAAGCTATTTTATAAAGCTGTTAGTTGAGAAGAAATATGCTTTGCCCTATCGAGTTATTGATGCAATGGTTGCACATTATATGAGATTTTGTGAGGACTCCAGGGATATGCCTGTGATCTGGCATCAGTCACTTCTTGCATTCATGGAAAGATACAAACACGAACTGACAAAGGAACAAAAAGATGATATCAATTATCTTGTGAAGAAGCAGAGACATAAATTGGTCACACCTGAAATATTAAGGGAGCTGAATAACAGCCGTAACCGTGGGGAGAAGGAGGATGACCTCATGTCAATTTCTTCCCCTATTTCGGTGATCAACAAAACTATAGAGGAAGATAGATTTGATATCCCAGATGTCCCCATGGAAGAAGATTAA | 1347 | 38.98 | MGRKRERIQNPQPFLADDTNKSASKKRTKKPAKQHQLEETLISEGMSSKILKEALIQQKEIQEETDAENPNNIVFPEEPVTQAQADDDDDDVDNFAGFSDNHSQFGGYEEEINEDEEKLLEAFFSRDARPQRTLADIIVEKIKEKDQLPSGLSAGTQPVPKLDDSIIEIYKSVGEIFKKYTSGKLPLAFKSIPAKQHWEELLYLTEPEKWSPNAVYQATRILASNMSSKKVERFYKFILLPRIRQDIRKNKKLHFALYQALKKAVYKPAAFNKGILFPLCESRTCNLREAVIIGSILQKVSIPPLHSSLALMKLAEMEYGGTTSYFIKLLVEKKYALPYRVIDAMVAHYMRFCEDSRDMPVIWHQSLLAFMERYKHELTKEQKDDINYLVKKQRHKLVTPEILRELNNSRNRGEKEDDLMSISSPISVINKTIEEDRFDIPDVPMEED | 448 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04376 | 448 | FunFam | Bystin (51.6 kD)-like | 183 | 400 | - | - | |
| Lomi2g04376 | 448 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Lomi2g04376 | 448 | Pfam | Bystin | 130 | 415 | IPR007955 | - | |
| Lomi2g04376 | 448 | Gene3D | - | 177 | 398 | - | - | |
| Lomi2g04376 | 448 | PANTHER | BYSTIN | 2 | 448 | IPR007955 | GO:0005730(PANTHER)|GO:0005737(PANTHER)|GO:0006364(PANTHER)|GO:0030515(PANTHER)|GO:0030688(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04376 | K14797 | essential nuclear protein 1 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 324078 | Lomi2g04376 | Lomi1g00281 | |
| 333399 | Lomi1g00281 | Lomi2g04376 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:2359129 | Lomi2g04376 | Lomi-Chr2:49150190 | wgd |