Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04382 | ATGGTGGAAGTTGACAGCAAATCAAACGAAGCTAATAATGGCAATGAAATCAAAATTAGATACAGCAACACGAAAAATAGATGGAAGCCGTATGGAATTATTGGAGCTGCAATCGCAATTTTAGTTGCTATATATCTTAATCCGTGGCGTCATTCTCTCAATAAAACCTACCTCTGTTCTCAGGATACTTGTAAACATCCACGCATCGTTGAGGACTGCTGTTGTGATTATGAGAGCGTTGATGACGTTAATGGAGAAATTTTACATCCCTTGTTACAAGAGCTTGTTAAGACTCCGTTCTTCAGATACTTCAAGCTTAAGTTATGGTGTGATTGCCCCTTCTGGCCTGATGATGGAATGTGCCGCCTGCGCGATTGCAGTGTATGCGAGTGTCCAGAACATGAATTCCCAGAATCTTTCAAGAGGCCATCACTCCATGTTCTTCCGCGAGATGACCCTGTATGTCAAGAGGGAAAGCCAGAGGCTACTGTTGACCGTACTCTAGATGCTAAGTCATTTAAAGGGTGGGTAGAAATAGACAATCCATGGATTCATGACGATGAAACTGATAATGGTGAAATGACATATGTGAATTTGCAACTGAACCCTGAACGTCATACGGGTTACTCAGGGCCATCAGCAAGAAGAATATGGGATGCTATATATTCAGAAAATTGCCCAAGATATGCATATGGAGAGACGTGCCCAGAAAAGAAAGTACTATACAAGCTAATATCTGGTCTGCATTCCTCAATTTCGATCCACATAGCTGCTGATTATCTCCTTGATGAGACTGCCAATCAGTGGGGTCCTAATCTTGAATTGATGCATGATCGTGTCTTGAAACATCCAGATCGCGTGGAAAATTTGTACTTCACTTTCCTATTTGTTCTTAGAGCCGTGACAAAAGCGGCTGCTTACTTGGATCAGGCTGAGTATGACTCGGGTAACCAAGTGGAGGATCTGCGAGCCCAATTGTTGATTCGACATTTGGTTCACAATTCCAAACTGCAAGCTGCATGTGCTCTTCCGTTTAATGAGGCTGAACTTTGGCAAGGCCATGGTGGACCAATATTCAGGCGACAAATCCAAGATCAGTTTCGAAACATCAGCAGTGCACTGATGGACTGTGTCGGGTGTGAGAAGTGTCGTCTTTGGGGAAAACTTCAGGTTCTTGGCCTTGGAACTGCATTAAAAATTCTCTTCTCTGTTGATGATCAAGGAAACCCAGATCCACAACTGGAATTACAAAGAAATGAAGTGATTGCCCTAATTAATCTACTAAATCGGCTGTCAGAATCTCTTATATATGTCACTAACATGAGAGATAAGGTTGCTATACAGCCTCCTGATAGAGATATCAATTTATATCACAGACGATGGGGATCACTGATAGCTCATTGGTGGAATAACCTAGCAAGAACTAACTGA | 1431 | 42.28 | MVEVDSKSNEANNGNEIKIRYSNTKNRWKPYGIIGAAIAILVAIYLNPWRHSLNKTYLCSQDTCKHPRIVEDCCCDYESVDDVNGEILHPLLQELVKTPFFRYFKLKLWCDCPFWPDDGMCRLRDCSVCECPEHEFPESFKRPSLHVLPRDDPVCQEGKPEATVDRTLDAKSFKGWVEIDNPWIHDDETDNGEMTYVNLQLNPERHTGYSGPSARRIWDAIYSENCPRYAYGETCPEKKVLYKLISGLHSSISIHIAADYLLDETANQWGPNLELMHDRVLKHPDRVENLYFTFLFVLRAVTKAAAYLDQAEYDSGNQVEDLRAQLLIRHLVHNSKLQAACALPFNEAELWQGHGGPIFRRQIQDQFRNISSALMDCVGCEKCRLWGKLQVLGLGTALKILFSVDDQGNPDPQLELQRNEVIALINLLNRLSESLIYVTNMRDKVAIQPPDRDINLYHRRWGSLIAHWWNNLARTN | 476 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04382 | 476 | SUPERFAMILY | ERO1-like | 75 | 445 | IPR037192 | - | |
| Lomi2g04382 | 476 | PANTHER | ERO1-RELATED | 40 | 444 | IPR007266 | GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(PANTHER)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0034975(PANTHER)|GO:0071949(InterPro) | |
| Lomi2g04382 | 476 | Pfam | Endoplasmic Reticulum Oxidoreductin 1 (ERO1) | 88 | 436 | IPR007266 | GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro) | |
| Lomi2g04382 | 476 | PIRSF | ERO | 33 | 468 | IPR007266 | GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04382 | K10950 | ERO1-like protein alpha [EC:1.8.4.-] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 118740 | Lomi11g01957 | Lomi2g04382 | |
| 122938 | Lomi2g04382 | Lomi5g02131 | |
| 324073 | Lomi2g04382 | Lomi1g00274 | |
| 333404 | Lomi1g00274 | Lomi2g04382 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr2:49195575 | Lomi4g02403 | Lomi-Chr4:31945698 | dispersed | |
| Lomi | Lomi-Chr1:2303853 | Lomi2g04382 | Lomi-Chr2:49195575 | wgd | |
| Lomi | Lomi-Chr11:27992729 | Lomi2g04382 | Lomi-Chr2:49195575 | wgd | |
| Lomi | Lomi-Chr2:49195575 | Lomi5g02131 | Lomi-Chr5:31951004 | wgd |