Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04385 | ATGAGTGATCACAAAGTAGAAAAGAGTATTGTAGCAACCCCTGATCAAATAGGATCATCAAATAATCAAGAAGAAGATAAGTCATCTGGCATTCGAACGGTGGAAACGTTGTTGAGGTTGTTTCCGGTGGGGTTATGTGTGGCTGGATTTGTTGTCATGATTAAAGATTCCGAGTCTAATGAATATGGATCTTTATCTTACTCGAACATCACCGCTTTCAGGTTTTTGGTGCATGCTAATGGAATATGTGCTGGTTATTCGCTACTCTCGGCTGCTTTCACAGCAATACCTCGCCCTGTAACCATGCCTCGAGCCTGGACCTTGTTTCTTCTTGATCAGGTTTTGACATACTTGATACTGGCTGCTGGTGCGGTGGCAACCGAGGTCGCGTTTCTGACATACAAAGGTGACGTGGCGGTGACGTGGAGTGAGGTCTGTGGGACCTACGGCCACTTCTGCAAACAAGCGACAGCATCAATCATCATCACTTTTGTCGTGGTGCTTTGTTACATTTCACTGTCACTCATATCATCGTATAGGCTATTCAGCAAGTATGATGCACCTGTTGGATACGATAACAAAGGAATCGAGATCGTTGACTTTGGGAACTAA | 612 | 44.61 | MSDHKVEKSIVATPDQIGSSNNQEEDKSSGIRTVETLLRLFPVGLCVAGFVVMIKDSESNEYGSLSYSNITAFRFLVHANGICAGYSLLSAAFTAIPRPVTMPRAWTLFLLDQVLTYLILAAGAVATEVAFLTYKGDVAVTWSEVCGTYGHFCKQATASIIITFVVVLCYISLSLISSYRLFSKYDAPVGYDNKGIEIVDFGN | 203 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04385 | 203 | PANTHER | CASP-LIKE PROTEIN 4A4 | 26 | 183 | - | - | |
| Lomi2g04385 | 203 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Lomi2g04385 | 203 | MobiDBLite | consensus disorder prediction | 13 | 27 | - | - | |
| Lomi2g04385 | 203 | Pfam | Casparian strip membrane protein domain | 29 | 169 | IPR006702 | - | |
| Lomi2g04385 | 203 | NCBIfam | plant integral membrane protein TIGR01569 | 38 | 179 | IPR006459 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04385 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 324070 | Lomi2g04385 | Lomi1g00271 | |
| 333407 | Lomi1g00271 | Lomi2g04385 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr2:49218068 | Lomi7g00253 | Lomi-Chr7:2486872 | dispersed | |
| Lomi | Lomi-Chr1:2281464 | Lomi2g04385 | Lomi-Chr2:49218068 | wgd |