AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04413 ATGTCGATTTCCACCGCCGTCAATATAGACTACAATATCGAATACCGATCGAAGAACGATGACGCATGGTACCTTTCCGGCGTCATTTTCGAAAACGGAAACCGGCTACGCGTAAAGTTTAAGGATTTCCCACAAAGCTACTACGATGAGGTTTTCTCGATCGACGATTTCTCGAATCACAATGATATTGATGAATTTATCGGTCGATTCCGTCATGTGTCTGAACCGATCGAAGATAACGAGTGTTCGAAAGTGATTCAAGGCATGACGGTTTGTGCTATCTATAGAGGCTGTGATGGATCGGTTAAATACTTTGACGCCATTGTTGATGATGTGTGTTACAAAGAGCATACACCTGCAAAATGTGTATGCAAGTATTCTCTGTTCTGGCAACATGGTCCTGAGAATGGCAATATAAGCGCAACAACACTTGATGATATATGGATCAACACAACTGGTGCTGTTAATCCCTTAGTTGCTGAATTCGAGAAGCTTGTGAAGGAAAAACTTAGAGTGGTCTCTTCTCAGTATGGTGGTGCGGGAAACAGTTCTCATGTTAGATTATCTGAAGGAAGAGAAAGGTTCTGCTATGAATTAAGTGATGACGATAGAGATCTGGGAGGTTTTAAAGATACTGGCTGTCATCATTACATAATATTAGAAAATTTGGAGAAAGATCTTTGCCCAATATTGATGATGCAGTTCATACAAGAGCAGACTTCAATCACAGGACAGGCATACGTCTTCCCAAATTTGTCAGTGGAAACATATTCAAGAGGATTAATCATGGTGGATAGCAGATCAAATATAAAAAGGATTTATGAATTTATAGACAATTCAAATCACATTATTGTATCTTTCTCTGGAAGGCCATGGGTAATAGCTGAAGAAATGCTTAAGACTGGAACTTTCAACACAAACCTGCGGAACTTGCAGCCAAGGTTCAAGAACATATATACAGGAAGGGAGTTAATGGTTGTTCGGCTTGGAACAGACGAATACAGGAGAGCTAAACAGCTAAAAGATCTATTTATGGAATATCGCAATCATCTTAATGGACTTGCACGCAGGTTAGACATGGAGGAGATGAAGAACCAGCATCCACCCACTGCAAATTAG 1119 40.21 MSISTAVNIDYNIEYRSKNDDAWYLSGVIFENGNRLRVKFKDFPQSYYDEVFSIDDFSNHNDIDEFIGRFRHVSEPIEDNECSKVIQGMTVCAIYRGCDGSVKYFDAIVDDVCYKEHTPAKCVCKYSLFWQHGPENGNISATTLDDIWINTTGAVNPLVAEFEKLVKEKLRVVSSQYGGAGNSSHVRLSEGRERFCYELSDDDRDLGGFKDTGCHHYIILENLEKDLCPILMMQFIQEQTSITGQAYVFPNLSVETYSRGLIMVDSRSNIKRIYEFIDNSNHIIVSFSGRPWVIAEEMLKTGTFNTNLRNLQPRFKNIYTGRELMVVRLGTDEYRRAKQLKDLFMEYRNHLNGLARRLDMEEMKNQHPPTAN 372
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04413 372 Gene3D - 77 145 - -
Lomi2g04413 372 Pfam SAWADEE domain 10 147 IPR032001 GO:0003682(InterPro)
Lomi2g04413 372 PANTHER SAWADEE PROTEIN 9 364 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04413 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
324057 Lomi2g04413 Lomi1g00246
333420 Lomi1g00246 Lomi2g04413
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:2103566 Lomi2g04413 Lomi-Chr2:49404528 wgd