Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04425	ATGTCAACGACCTCGTCTTCTTCGTCGTCACACGACGGAGGAGACGGTGGTGGTGGAATCGCCGTTGGTGGTGGTGATGAGTTTGAAGAACCGTCACATTCTCGTCAACGTTTCAACTCCGCCGTGTGGCCAGAACCTTTCCTTGAAGCTCTCGCTACTCAAATCGCCATTGATGCTGCTATCTCTTTTGGTCGTCTCGCCGCTGTTCCCGCTCTTTTCAATCTATTTCAGGTTTGTAGAACTTGGCGAACTGTATCGCAGTCTGACCTCCTTTGGCAGACCCTTACACGTCATATTTGGCATTGCAACCACCTCCTCCATCCTACTTGGCATGAAGAATACATTTACCGCCACCGAACTGCTAGAAACTTTGGTGCCCGGAGGTATATCTACACCACCCTGCACTTCCCCCCACATGATAAGAATAATAACGGTAGCCTCTCTTGTCGCCGCCTTGCACTATCTGATTACCACCTTGCTGCGGGGTTTTCTGATGGCTCAGTTCGCGTATTCCACCTCCCCACAAGGCTCCACCTGTCCACATTCCACCCACAACAACGTAACCACCTTGGCCCCTTTTCTCGTGCCGTCTCTGGGATCTTTTTTGCAGATAACAGGCTTGTTTTTGCCTCCCTTGATGGTGATATTCATGTTGCTTCTATCAACCTACCAGGAGCTCCACGTCGGGCCCACTTGGGTGATGTGGTCACTGATGGCGTACTTGTGGATTTTACTGGTTGTAACCGGTGGTGGGTCGGGCTTTACGCAGGTGTTCCAAACCGTGCTTTCCATGTACGAAATGGTAATACTGAAGAACTTGTGTTCATTGGTGGCACATTAACGGACCCAGATGCTGTATTTGGTTGGCACTTACTGACAGACCTAACTGAGCACGTAGGGCGTATCCGCATAACAAGTGATGATCTGGCAGTAGGTTTCACGAGCAGCAGGGTTATTGTATTTGATTTGAGAAACCAAATGATATTAGGAGAAGAAGAGTTTGGGAGACGGATAAATGTTGGTGCAGCTGATGCTTACAATAAGGCTCTTGTGTTTGTAAATAGTAGGGGTGTAGCTAATGTACGGCAGGTGAGTAGTTTAGAGGAAATGTGTCGGTTCAGGGCACATGGTGGCTTCTTGCTGGGTTGCATAAATGGTGGTTACTCTTTTATTTACAGTGGGGATGGGATTAGAGTTTGTGAGTTGGATCATGGAGCGTATTTGTACGTTTTGAGAGAAATGATAGGGGTAGATGTAACTGCATTGATTGCAGATGAACGGTATGCAGCTGCTTGTAGTAGCAGTGACAACTCGGTTCATCTATGGGATTTTGGAGCACATTTATAG	1347	47.88	MSTTSSSSSSHDGGDGGGGIAVGGGDEFEEPSHSRQRFNSAVWPEPFLEALATQIAIDAAISFGRLAAVPALFNLFQVCRTWRTVSQSDLLWQTLTRHIWHCNHLLHPTWHEEYIYRHRTARNFGARRYIYTTLHFPPHDKNNNGSLSCRRLALSDYHLAAGFSDGSVRVFHLPTRLHLSTFHPQQRNHLGPFSRAVSGIFFADNRLVFASLDGDIHVASINLPGAPRRAHLGDVVTDGVLVDFTGCNRWWVGLYAGVPNRAFHVRNGNTEELVFIGGTLTDPDAVFGWHLLTDLTEHVGRIRITSDDLAVGFTSSRVIVFDLRNQMILGEEEFGRRINVGAADAYNKALVFVNSRGVANVRQVSSLEEMCRFRAHGGFLLGCINGGYSFIYSGDGIRVCELDHGAYLYVLREMIGVDVTALIADERYAAACSSSDNSVHLWDFGAHL	448

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04425	448	SUPERFAMILY	F-box domain	71	119	IPR036047	GO:0005515(InterPro)
	Lomi2g04425	448	Gene3D	-	128	447	IPR015943	GO:0005515(InterPro)
	Lomi2g04425	448	SUPERFAMILY	WD40 repeat-like	145	444	IPR036322	GO:0005515(InterPro)
	Lomi2g04425	448	Gene3D	-	61	125	-	-
	Lomi2g04425	448	MobiDBLite	consensus disorder prediction	1	35	-	-
	Lomi2g04425	448	PANTHER	WD40 REPEAT PROTEIN 12, 37	27	393	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04425	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	324046	Lomi2g04425	Lomi1g00232
	333431	Lomi1g00232	Lomi2g04425

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:2007991	Lomi2g04425	Lomi-Chr2:49490603	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Lomi	None	None	None		TF	SAP