AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04432 ATGGCTCTTCATTCTATGGGAAGGCAAGGCGGTAACTCAATAGGGGCAGGTGGCGGTAGCAGTGGTATTTCGTCTATAGCTCTCCTGCAAGAAAGATTCAGGCAGCTGCAGAAAATGAAGGAGAAAAGACAAGAGATTGAGCTTTTAAAGTTGTTCCCTGTGTCTGAAACTGCGGATCAATTTAACGATTATGAACCTAATCCCCCTGTGGGTTCAGTGGTACATCCTGAGCTAACGACAACAAGACCATGTTTTCAAGATTCTCTATCTCTTGGACTAAACTTATACACCAAGCAAGCAGAAGCACAAAAACCTGCAAAACAGCCACTGTTTGTGGACTTCTGGTCAGTAGATTCAACGTCTGTGAGCACAATTCATGCTCATGATAAAACTGAGGTTGATACCTCCCTTCATCTGTAG 420 43.81 MALHSMGRQGGNSIGAGGGSSGISSIALLQERFRQLQKMKEKRQEIELLKLFPVSETADQFNDYEPNPPVGSVVHPELTTTRPCFQDSLSLGLNLYTKQAEAQKPAKQPLFVDFWSVDSTSVSTIHAHDKTEVDTSLHL 139
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04432 139 PANTHER OS03G0593100 PROTEIN 23 139 - -
Lomi2g04432 139 Coils Coil 29 49 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04432 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
122954 Lomi2g04432 Lomi4g02580
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr2:49535857 Lomi3g00788 Lomi-Chr3:6404489 wgd
Lomi Lomi-Chr2:49535857 Lomi4g02580 Lomi-Chr4:33377248 wgd