AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04437 ATGTTACTATCACCGGGCCACTCACCCCGCCGTCTCTCATCTCCATCACCATCACCATCAATCTCTGAAACACCGGTCCATCAAACCCCCGGTTCATCCAATTGTATAACCACCACAACTCATAGAAACCCTAGAAAACGCTCATCTTCGACCGTCCTCGATGAAGACACATACGTTGCCGCAATCGAAAAAATCATCGAACGCGATTTCTTCCCAGATATTCCGAAGCTTCGAGACCGACTCGAGTGGCTCGAAGCTACTCGTTCCGGTGATCCGATGCTTATGCGTGATGCGCAGTTGAAAATTATCGAACGGCGGTCTGGTAAAACTCCGGCTACGGATACGGCAGGTAAAATTCGGACACCTGGTTCGACGTTTTTCCGTAATACTATTACACCGTATGATAGTGATAGAACACCTGTAATCGATACGAAACAAGAGTTTTTAAATGTTCCTAAAGAAATAATTAGTAAGGATGGTAATGGGGATGTAAATCCCGATAATTTAACGCTTGATGCGTTTTTTCGAAAGTATACAAGTGAGGATAATGATAGTTTTTCGAAATTGATCGAGAAGACTAATAGAAAGAAAAGAGAGAGGTATGGGTTTTTGTTAGAAGGTGAGAATCGAGGGACAATGGGGTTAATAGAGGACGCGAAAAAGGATAGGATTACGGATGGGTATGGGTCGTCTGATCAGCCTGTAGCTACATTGGATGGTTGGAAATATACTGCAAAGAATCTGTTAATGTATCATCCTGCGGATAGAGGTGAGGTAGCGTTGACTCAGGAGGAGTTAGCAAATAGGTTGAAAGGGATGACGAAGGAAATTAGTAAAACGAATACGAGGTTTCATGGGAAAATGCTAGATTCTAGACCTAAAGAGGAGGATGAAATATCGGTACTTTATAATCCAGTTGCTGGTAGTACGCCGGTTCCTTGGTCTATGTCGGATAGGGATGGAGATAAGGGGAGAAAGTATGATTTGGAAGATTTGAGGAAGACTCCGAATCTGTTTTATGTTGAATCTAATAAGAAGGCAGATAATGGGTATAGTTATGTTAAGACGCCGTCCCCTGCACCGGGTGTGGATGAATCGCCATTTATTACGTGGGGTGAAATTGAAGGGACGCCCTTGAGACTGGAACCGGAAGATACTCCTATTGACATTGGTGGTAGTGGAAACGGGCCTCAGTTTAATATCCCCCTTCCACCTACGAGAGATGTAAAGGCTCATTCTTTGTCCAGGGAGGCTGCTCGGAAAATCAGGGAGCGGTCTAGAATGTTTCAGAAACCACCTCTTCCATCTGCAGCTAGAGGTGGTAGTGCTAGTCCTGGTGCACGGACTCTGTCCCCTGCTGCCCAGAAATTTGTCCGAAATGCAATTGCCAAGTCCTCTCATTCTGCTACTGTTGATGAGTCACTGCGTGCAAGTTATCGTGGGTCGAGTCCTGGGTTGGCTACACCAAAATTGGGAAGAAGTACTTCGAGGTTAGGAAGGGATGGGAGTTTGAGTTCAAGGTCACCTTCTGTTAGGGAGGGCTCTAATCCTCCTTGGTAG 1560 45.32 MLLSPGHSPRRLSSPSPSPSISETPVHQTPGSSNCITTTTHRNPRKRSSSTVLDEDTYVAAIEKIIERDFFPDIPKLRDRLEWLEATRSGDPMLMRDAQLKIIERRSGKTPATDTAGKIRTPGSTFFRNTITPYDSDRTPVIDTKQEFLNVPKEIISKDGNGDVNPDNLTLDAFFRKYTSEDNDSFSKLIEKTNRKKRERYGFLLEGENRGTMGLIEDAKKDRITDGYGSSDQPVATLDGWKYTAKNLLMYHPADRGEVALTQEELANRLKGMTKEISKTNTRFHGKMLDSRPKEEDEISVLYNPVAGSTPVPWSMSDRDGDKGRKYDLEDLRKTPNLFYVESNKKADNGYSYVKTPSPAPGVDESPFITWGEIEGTPLRLEPEDTPIDIGGSGNGPQFNIPLPPTRDVKAHSLSREAARKIRERSRMFQKPPLPSAARGGSASPGARTLSPAAQKFVRNAIAKSSHSATVDESLRASYRGSSPGLATPKLGRSTSRLGRDGSLSSRSPSVREGSNPPW 519
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04437 519 Coils Coil 263 283 - -
Lomi2g04437 519 MobiDBLite consensus disorder prediction 461 477 - -
Lomi2g04437 519 MobiDBLite consensus disorder prediction 410 428 - -
Lomi2g04437 519 PANTHER ES-2 PROTEIN - RELATED 13 509 IPR019148 GO:0071013(PANTHER)
Lomi2g04437 519 MobiDBLite consensus disorder prediction 394 519 - -
Lomi2g04437 519 MobiDBLite consensus disorder prediction 498 513 - -
Lomi2g04437 519 MobiDBLite consensus disorder prediction 9 46 - -
Lomi2g04437 519 Pfam Nuclear protein Es2 50 457 IPR019148 -
Lomi2g04437 519 MobiDBLite consensus disorder prediction 1 51 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04437 K13118 protein DGCR14