Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04442 | ATGGACAACAACGTATCTAAAGGAAGTGTTTTTGTGACTGTTGGCACAACATCATTCGATTCTCTTGTTAAAACTGTTGACACTGACCATGTTAAAAAAGGCTTGTTAGAAAAAGGTTACACTCACCTTGTCATTCAAATGGGCCGTGGATCCTACGTCCCTAAAAAGTCTAGTGGCGAAGATGGATCACTGGTTGTCGATTACTTTACTTTTAGTTCTAGCATTGCAGACTATTTGAAATCAGCATCTCTTGTTATAAGTCATGCAGGTTCAGGGAGTATATTTGAGACACTAAAGCTAGCCAAACCTTTAATAGTGGTAGTGAATGAGGACCTGATGGACAACCATCAAAGTGAGCTTGCTGAAGAGCTAGCAGAAAGGAAGCATTTATTTTGTGCTAACCCTCAAATGCTCTACCAGATCATTGAATCATTACATTTGGATTCAATTGTTCCATACGAGTCAGGTGATGCTACTCCCGTTGCTAAACTAATCAATAGGCATCTTGGTTTTCCTGCTGATTGA | 525 | 39.62 | MDNNVSKGSVFVTVGTTSFDSLVKTVDTDHVKKGLLEKGYTHLVIQMGRGSYVPKKSSGEDGSLVVDYFTFSSSIADYLKSASLVISHAGSGSIFETLKLAKPLIVVVNEDLMDNHQSELAEELAERKHLFCANPQMLYQIIESLHLDSIVPYESGDATPVAKLINRHLGFPAD | 174 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04442 | 174 | Gene3D | Glycogen Phosphorylase B; | 4 | 169 | - | - | |
| Lomi2g04442 | 174 | FunFam | UDP-N-acetylglucosamine transferase subunit alg13 | 4 | 169 | - | - | |
| Lomi2g04442 | 174 | Pfam | Glycosyltransferase family 28 C-terminal domain | 10 | 158 | IPR007235 | GO:0016758(InterPro) | |
| Lomi2g04442 | 174 | PANTHER | UDP-N-ACETYLGLUCOSAMINE TRANSFERASE SUBUNIT ALG13 | 6 | 173 | IPR052474 | GO:0006488(PANTHER)|GO:0043541(PANTHER) | |
| Lomi2g04442 | 174 | SUPERFAMILY | UDP-Glycosyltransferase-glycogen phosphorylase | 41 | 145 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04442 | K07432 | beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 324039 | Lomi2g04442 | Lomi1g00223 | |
| 333438 | Lomi1g00223 | Lomi2g04442 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:1913570 | Lomi2g04442 | Lomi-Chr2:49599023 | wgd |