Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04443 | ATGGCTATAACTATCAGCTCTACCCTCATCCTACTGTTTTTGTTTCTTGCATCTTTAGACATATCATACGCTGGAATGTGCACAGACCACAAATTTACATCTAAAAGAGTATACAGTTCTTGTAAAGATCTTCCACATTTAACTGCTCATCTCCACTGGACCTACAATGCATCCATGGGCATAGCGCAGATCGCATACCGAGCCAGACAAGGTTCCCGTGGTTGGGTGGCTTGGGCAATCAACCCGAACCAAATAGGTATGGTTGGGTCAGAAGCACTGGTGGCTTTCCACAACAGTAATGGAAGTATAACAGTATACCCAACGATGATAACAAGTTATAGCCCATCAATGTTGCCTGAAGATCTTAGCTTCCGGGTTTCAGGCCTTTCAGCTGAGTTCTTAAACAACGAGATTACCATTTACGCGACTGTGGGCCCGTTTTCAGGTGGGTCGCTTGTTAACCAAGTATGGCAAGCTGGGAGTTTGGTTTTGGATGATGTCCCTCAGATGCACGAGGTTTCACAGCAGAATCTTGAATCAACAGGAGAACTTGATTTCTTGTCTGAATAG | 570 | 44.56 | MAITISSTLILLFLFLASLDISYAGMCTDHKFTSKRVYSSCKDLPHLTAHLHWTYNASMGIAQIAYRARQGSRGWVAWAINPNQIGMVGSEALVAFHNSNGSITVYPTMITSYSPSMLPEDLSFRVSGLSAEFLNNEITIYATVGPFSGGSLVNQVWQAGSLVLDDVPQMHEVSQQNLESTGELDFLSE | 189 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04443 | 189 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 8 | 188 | - | - | |
| Lomi2g04443 | 189 | CDD | DOMON-CIL1-like | 38 | 188 | IPR045265 | - | |
| Lomi2g04443 | 189 | ProSiteProfiles | DOMON domain profile. | 47 | 160 | IPR005018 | - | |
| Lomi2g04443 | 189 | Pfam | Protein of unknown function (DUF568) | 87 | 186 | IPR045265 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04443 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 122958 | Lomi2g04443 | Lomi5g02169 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr2:49600233 | Lomi8g02176 | Lomi-Chr8:29751799 | dispersed | |
| Lomi | Lomi-Chr2:49600233 | Lomi2g04444 | Lomi-Chr2:49601531 | tandem | |
| Lomi | Lomi-Chr1:1911477 | Lomi2g04443 | Lomi-Chr2:49600233 | wgd | |
| Lomi | Lomi-Chr11:28267635 | Lomi2g04443 | Lomi-Chr2:49600233 | wgd | |
| Lomi | Lomi-Chr2:49600233 | Lomi5g02169 | Lomi-Chr5:32224190 | wgd |