Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04463	ATGGAGCAGGAAAGAAATGATCATGAAATAATGGTTACATGGAGAGGAAAGAAGTACATCGTGAGTATGAATTTAGGTGCCACTCTCAAAGAATTAGGGCATGAATTACAGAAACTGACCGCAGTGAAAGCAGATACTTTAAAGCTTATTGTTCAATCTCGGAAATCATCGAAATTGTTATCTCCTTTTTCGGATGAGCACGCTCCTCTCACTTTGCAGGAAACTTCCGTCATTGAGGGGAAATCTATACAAATGATGGGAGTGCCAAAAGAAGAGATTGATCAGGTTTTAAAAAGTGCAAAGATGGACATGAGAATAGCTGGATTTGATGAAGAGGAGAAGCGAATCAGAAGAATGTCAAATGGGTTTGATGCACCATTGAAGCTTCCTCAAGGAAATTATGTTTTTGGTGATTTTAAAACGCTTGAACTTCCAGGGATTGAGTTAAATCCTCCAGCTTCAGAGGCATTGCGACTAATGCACACGCTTGCTGCAGATCGAGGAATTGTTGCTATTATGAATAAGCATAAATGGCGTGTGGGAATCATGACTGAGATGGCTCCAGAAGGTTACGTTGGTGTAAGTCCTGTGTGTATCCTTGGTTTTAACAAGAATCACGGTGAGGAGATATCTTTGCGTCTTCGAACTGATGATCTCAAGGGTTTCAGAAAATATCAGAGCATTAAGAAGACCCTTCTGCATGAACTTGCCCATATGGTTTTCTCTGAACATGATACGAAATTCTATGCTCTGGATAGTCAGCTTAACAAAGAGGCCGCTGCTCTGGACTGGACTAGATCCACAGGTCACACCTTAAGCGGGTCCCAGAAGACACAACAATTTGGATACGAGTTTCATGTTGCTGATAGTAGTAGTAGTAGTAGTTTGTCTCATAAACTTGGGGGAAACCAGACGCCCAATTCACTGGCTAATGCTCGGGCATCTTCAGTCGCTGCTGCTTACCAGCGTTTAGTGATTGCATCCGAGAATCAATTAACAACATCTGAAACACATAATGAACCTGATCCTGATGATTTTATGGATGTGATCATGACTAAACCAGATGCCATGGACATTAGTGAAAAACAAACTAATGAACCTGACCCTGATGACCATGAAGTGCTGAACAAGAATAATGAGCCCGACCCAGATGATAGCATTGATGGTAAAGCTATAGAATCTGAACCATGTGAAGAGTTGACCCAAAACAGAGTTACTTCTGAAGAAATTAATGAAACCTTTGTTGGTGGGTCTGAAAATGAACTTAAGAGGGAAACCAACGAGCCTGACCCTGATGATGGTATGCTACAAGATGAAGAGCTACAGAGAATTCAAGATCCAGTTGTGATTGCTTGTAATCGTCTGAAAAAATCCATTGAGACCTTGCAATCTGAAGTTAGTCCATCAGAGGCTGCCTTGGTTTTTAAGACTCTCGTTAAGATAGTCAAGAATGTTATCGAACACCCTAATGAAACGAAGTTCAAGAAATTACGCAAGGCTAACCCTGTAATTCAGAGGAACATAGCAAGTTACAACGCTGCAATGGAGATATTGTTCTTGATTGGTTTTTGTGAAGATGTTGTTCAAGATGAGATAGGCAGAGCAGAGGCTTACTTGGTGTTGAAGAGGAATGATCCAGGCTTGTTGTGGTTGGCTAAATCCTCTTTAGAGACGTGCATTGCTTTCTAG	1689	41.21	MEQERNDHEIMVTWRGKKYIVSMNLGATLKELGHELQKLTAVKADTLKLIVQSRKSSKLLSPFSDEHAPLTLQETSVIEGKSIQMMGVPKEEIDQVLKSAKMDMRIAGFDEEEKRIRRMSNGFDAPLKLPQGNYVFGDFKTLELPGIELNPPASEALRLMHTLAADRGIVAIMNKHKWRVGIMTEMAPEGYVGVSPVCILGFNKNHGEEISLRLRTDDLKGFRKYQSIKKTLLHELAHMVFSEHDTKFYALDSQLNKEAAALDWTRSTGHTLSGSQKTQQFGYEFHVADSSSSSSLSHKLGGNQTPNSLANARASSVAAAYQRLVIASENQLTTSETHNEPDPDDFMDVIMTKPDAMDISEKQTNEPDPDDHEVLNKNNEPDPDDSIDGKAIESEPCEELTQNRVTSEEINETFVGGSENELKRETNEPDPDDGMLQDEELQRIQDPVVIACNRLKKSIETLQSEVSPSEAALVFKTLVKIVKNVIEHPNETKFKKLRKANPVIQRNIASYNAAMEILFLIGFCEDVVQDEIGRAEAYLVLKRNDPGLLWLAKSSLETCIAF	562

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04463	562	PANTHER	ZINC METALLOPROTEINASE-LIKE PROTEIN	1	406	-	-
	Lomi2g04463	562	SMART	PGNneu	473	542	-	-
	Lomi2g04463	562	ProSiteProfiles	WLM domain profile.	132	325	IPR013536	-
	Lomi2g04463	562	SUPERFAMILY	Ubiquitin-like	7	90	IPR029071	-
	Lomi2g04463	562	Pfam	PUB domain	474	547	IPR018997	-
	Lomi2g04463	562	SUPERFAMILY	PUG domain-like	450	560	IPR036339	-
	Lomi2g04463	562	CDD	PUB-WLM	459	558	-	-
	Lomi2g04463	562	Pfam	WLM domain	147	324	IPR013536	-
	Lomi2g04463	562	Gene3D	-	455	556	-	-
	Lomi2g04463	562	Gene3D	-	3	93	-	-
	Lomi2g04463	562	MobiDBLite	consensus disorder prediction	360	391	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04463	K22685	DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	324028	Lomi2g04463	Lomi1g00204
	333449	Lomi1g00204	Lomi2g04463

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:1802437	Lomi2g04463	Lomi-Chr2:49748142	wgd