AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04465 ATGAGGAAACTTTACAACCACAATAAAGGCAAAATCTACCCATCACCGCCGCCGTCCACTACCACCGCCGACCACCTATCTCTACTACCGTTCAAAATAGCCGTTCTCGCCACCACCCTGCCACCAGAAGACAAAGAAGTTTTAGCATACCTTCTTTCATGTTCTCTCACCACCAACAACAGCAACAACAAAGTCAATAATAATAACATATCCAACAAAATTGGCGGCGGTGGTGGAAGTCATCCGCCGGAATTCAACTGCAACTGTTTTTCATGTTACACTAGTTATTGGGTTCGTTGGGATGCTTCATTAAACAGACAACTGATTCATGAAATCCTTGATGCTTATGAAGATGGATTGATTTATAATAAGAAAAATGGGAAGAACAAAAAAGATAGAAAAAAGAACAAGATATCTCGACACCCGCCGCCCGCTGATACAGAGGTAGTGTCTCACGCGCCGCCGCAAGTTGAGGAAAACAAGATTAACATTGACGGAAATGTTAATGATGATGGTTGTGATAAAGGATCAGTAAGAAAGTTTGTAAATTTCATTGGGGGAAGGATATGGGGTGTTTGGGGTATTTGA 588 42.01 MRKLYNHNKGKIYPSPPPSTTTADHLSLLPFKIAVLATTLPPEDKEVLAYLLSCSLTTNNSNNKVNNNNISNKIGGGGGSHPPEFNCNCFSCYTSYWVRWDASLNRQLIHEILDAYEDGLIYNKKNGKNKKDRKKNKISRHPPPADTEVVSHAPPQVEENKINIDGNVNDDGCDKGSVRKFVNFIGGRIWGVWGI 195
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04465 195 MobiDBLite consensus disorder prediction 126 156 - -
Lomi2g04465 195 PANTHER F12F1.11-RELATED 1 194 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04465 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
122963 Lomi2g04465 Lomi4g02594
324027 Lomi2g04465 Lomi1g00202
333450 Lomi1g00202 Lomi2g04465
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:1791983 Lomi2g04465 Lomi-Chr2:49763062 wgd
Lomi Lomi-Chr2:49763062 Lomi3g00769 Lomi-Chr3:6285014 wgd
Lomi Lomi-Chr2:49763062 Lomi4g02594 Lomi-Chr4:33479354 wgd