Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04487 | ATGGCATTAAACAGGGCTGGATCATGTAATCCGGCCGTTGTAAAGATCGGAATTACATTTTTAGGGTTGTGTTTGGTGGGTTATTTATTAGGTCCGCCGTTATATTGGCACGTCCTTGAAGGATTAGCCGCCGTCCGCCGCTCATCCTCCGCCGTATCTTGCCCTACTTGCAACTGTGACTGTGATTCTCAACCACTTCTTACAATTCCTCAAGGGCTTAGCAATGGTTCCTTCACAGATTGTGCAAAGCATGATCCTGAAGTAAGTGGAGACACAGAAAAGAATTTTGCAGAGCTTCTATCCGAGGAATTGAAGCTACGAGAAGCTGAAGCTTTAGAAAGTCAACAACGTGCTGACATGGCACTACTCGAGGCCAAGAAGTTGACATCCCAGTATCAGAAAGAAGCAGATAAGTGCAATTCAGGAATGGAAACTTGTGAAGAAGCTCGTGAAAAAGCTGAAGCAGCCTTACTTGCACAGAAACAACAAAGTGAGATGTGGGAATCAAGAGCCCGGCAGAAAGGCTGGAAGGAAGCCAGCACCAAGTCTGTAAACACTGCATAG | 564 | 45.92 | MALNRAGSCNPAVVKIGITFLGLCLVGYLLGPPLYWHVLEGLAAVRRSSSAVSCPTCNCDCDSQPLLTIPQGLSNGSFTDCAKHDPEVSGDTEKNFAELLSEELKLREAEALESQQRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEAALLAQKQQSEMWESRARQKGWKEASTKSVNTA | 187 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04487 | 187 | Coils | Coil | 106 | 126 | - | - | |
| Lomi2g04487 | 187 | PANTHER | EXPRESSED PROTEIN | 1 | 184 | - | - | |
| Lomi2g04487 | 187 | MobiDBLite | consensus disorder prediction | 158 | 187 | - | - | |
| Lomi2g04487 | 187 | Pfam | Protein of unknown function (DUF1068) | 12 | 178 | IPR010471 | - | |
| Lomi2g04487 | 187 | Coils | Coil | 143 | 163 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04487 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 122971 | Lomi2g04487 | Lomi5g02198 | |
| 324011 | Lomi2g04487 | Lomi1g00180 | |
| 333466 | Lomi1g00180 | Lomi2g04487 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:9211960 | Lomi2g04487 | Lomi-Chr2:49938811 | dispersed | |
| Lomi | Lomi-Chr2:42613653 | Lomi2g04487 | Lomi-Chr2:49938811 | dispersed | |
| Lomi | Lomi-Chr2:49938811 | Lomi4g02990 | Lomi-Chr4:37067007 | dispersed | |
| Lomi | Lomi-Chr1:1622948 | Lomi2g04487 | Lomi-Chr2:49938811 | wgd | |
| Lomi | Lomi-Chr2:49938811 | Lomi5g02198 | Lomi-Chr5:32444235 | wgd |