AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04488 ATGGACTTTGATACACTAACCGATCTAATCAATAAATCTCAGATCGGATTCCGACTATTCGCCGGACTTCCATCATTCAACCCTAACGACACCACTCTACCTTCTCTTCCCACCGTTGCGGCATCTATCTCTGCCGTAGACCCGTCGCCGTCGAACCTGAGATGCAAATTCTGTAAGGGAAAGCTTTTGAGAGACTTACAGTCACTAATTTGTATATACTGTGGTGAATTTCAGAAGAAAGATGTTCATCCTGATCATATTGCCTTCAATTCCACCATTGGTTATAGCTGGTTACTTCAATCATTGAACTTTAATGGATCAGAAAGAGTTGGGTCTTTGGCTGAAGATTTTGGGTTAAATGGAGCTCAGAGCCCTGCAGAAGATGAAGCAAGTTTGTCTGAGCTCCTAGATTTGAAGATTACATGGCGGGACCAGCCTAAGAAATCTAAGAATCTCAAGACCTCTTTACGTAACAGTTCTTTGAATCTTGATACAGCCGATGTGGATGATTTCTTTATAGAGTCAAAGAGGAATATTGTGTCTGATGTACGTGAAGAACTACCAGTTGCCAACAAAAATGAACAGAATAAGGCCTTTGAGGTTCAAGAGAATAATAATGTTTTGCCATCTGAGACACCTGGCACTTCCCCCATTGATGTGGGTGATGATACTTCATCTGATTGGAATGCAGAATTTCAATTTGCAGATACCCAAATTGAAGATGAGATTCCCAAATCAGCTGAGCCTTTTGTAGGTTCTGAAGCTGATACGTCTTTCCAAATTGATTCAATTTTTGGGCAGAAGGAAAGCTTCAGTAACAAAAAATTGAATGATGATTCAGATTTGTTTCAAGATGACCTTTTTGCTAATGTAAGTTCTGCAACTGAGAAGTTGGATTCAGATGTTAAAGCAGATTCTGGGTTATCGGGTCATGTATATGATCTCAATTCAAAAGATGCAGATGAAGACTGGTTTGGTGATGGCAATTGGCAGAAAAGTGTTTCTAACAACACTGTCATCTCTCAGCAGGCTGATCAGTTAGACTTGTTCGACAATGTAAATGATGGATCTTCGCGCGATAATCAAAATGATTCATCAACAGATTGGTTTGAAAATACTAACTGGCAGAAAAGTGGTGTCGAAAACACTGCTTCGATGCAGGCTGATCAGTTAGACTTGTTTGACAAAGTAAATGACGGATCTTCACAGGATAATCAAAGAGATTCAGCTACAGATTGGTTTGGGAATAGTGACTGGCAGAAAAGTGGTGCAGAAAACACTGCTGTCTCTCAGCAGGTTGATCAGTTAGACTTGTTTGACAAAGTAAATGATGGATCTTCACAGGACAATCAAAATGATTCATCAACAGATTGGTTTGAAAGTAGTAGCTTCCATAATATTACTGCTAACAACACAGCAATCATTAAGAATGATAATTTATTTGATATTAAACCGCAGATTGATCCAATCTCTTCACCGTCATTGGTTAATAACTTGATAGAGTCTGAAAAGTCAGATCTTGATAATTCAGACAAACAACATTCAGATGCTACTGACTGGTTTCAAAATAGTCAATGGCCAATTGGTGCTTCTAGTTCTACCAATATTGTGGCCAGCAAAGATGATGATGACGATGATGGGTTTGATGAATGGAATGATTTCACAAGTTCAACTGGTAATCAAGATTCTTGGAAACAAAGTAGTAATGAGAAAAATGCTGCTGGCGAAAAGACGTCGGAATCAAATTTTCTTCCCTCAATATCTAATCCACAGGAAGTCGATTTTGGCAACTTCTTCCAGTCGGATCCATTTTCTGGTTCATCTAGTAATAAAGATTCAAAAGATACTCATGCAGTGTATGATATCTTTTCAGAAGTATCTACAAGAAGTAGTAATGTCAATGTTGAAGCTGGAAATAGTGCCGATGGACTAAAGAATGATGAAAGTACTCTCAATGCAACTATAAGTCCGAAGAATGATGTACAAAAGCTATTGTCAGAGATGCATGACCTGTCTTTCATGCTCAAGAGCGAGCTTTCAATTCCCTCGAAGCCAAATGATCTTGATTCTTCTCACAGTTAA 2082 38.71 MDFDTLTDLINKSQIGFRLFAGLPSFNPNDTTLPSLPTVAASISAVDPSPSNLRCKFCKGKLLRDLQSLICIYCGEFQKKDVHPDHIAFNSTIGYSWLLQSLNFNGSERVGSLAEDFGLNGAQSPAEDEASLSELLDLKITWRDQPKKSKNLKTSLRNSSLNLDTADVDDFFIESKRNIVSDVREELPVANKNEQNKAFEVQENNNVLPSETPGTSPIDVGDDTSSDWNAEFQFADTQIEDEIPKSAEPFVGSEADTSFQIDSIFGQKESFSNKKLNDDSDLFQDDLFANVSSATEKLDSDVKADSGLSGHVYDLNSKDADEDWFGDGNWQKSVSNNTVISQQADQLDLFDNVNDGSSRDNQNDSSTDWFENTNWQKSGVENTASMQADQLDLFDKVNDGSSQDNQRDSATDWFGNSDWQKSGAENTAVSQQVDQLDLFDKVNDGSSQDNQNDSSTDWFESSSFHNITANNTAIIKNDNLFDIKPQIDPISSPSLVNNLIESEKSDLDNSDKQHSDATDWFQNSQWPIGASSSTNIVASKDDDDDDGFDEWNDFTSSTGNQDSWKQSSNEKNAAGEKTSESNFLPSISNPQEVDFGNFFQSDPFSGSSSNKDSKDTHAVYDIFSEVSTRSSNVNVEAGNSADGLKNDESTLNATISPKNDVQKLLSEMHDLSFMLKSELSIPSKPNDLDSSHS 693
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04488 693 MobiDBLite consensus disorder prediction 203 226 - -
Lomi2g04488 693 MobiDBLite consensus disorder prediction 516 537 - -
Lomi2g04488 693 MobiDBLite consensus disorder prediction 396 429 - -
Lomi2g04488 693 MobiDBLite consensus disorder prediction 506 614 - -
Lomi2g04488 693 MobiDBLite consensus disorder prediction 350 371 - -
Lomi2g04488 693 MobiDBLite consensus disorder prediction 552 613 - -
Lomi2g04488 693 PANTHER DENTIN SIALOPHOSPHOPROTEIN-RELATED 1 468 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04488 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
324010 Lomi2g04488 Lomi1g00179
333467 Lomi1g00179 Lomi2g04488
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:1608315 Lomi2g04488 Lomi-Chr2:49945431 wgd