Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04493 | ATGATTTACCTTTTCTTCACGGTTTTATTCGTCGAAATGATTACGATATTATTACTTCTATTCAAAACCCCACTCCGTAAGCTTTTAATATTAGGGTTAGATCGTGCGAAACGTGGCAGGGCACCATTGGTTGTTAAATCCGTCGGAGCCACCGTTTTTGTAATCATGATGTATAACGTTTACAGTGTAACGGAGATTCAAAGCCGGCCTGCTGACGTCCTTAATCCGACCGATCAAATCATACTCGCTTACCATATGCTTGAAGCTTCTCTCATGGGATTCTCGCTTTTCCTGTCACTAATGATAGACAGACTACATCATTACATAAGAGAGCTTCGCATACTTCGAAAGACCATGGAAACTGCAAAGAAACAAAACCGAGCTGCTGAAGAAACCAAGAACAAAGGTGCAGATGAGGTTAAAGTTCTGAATGATGAAATGTCTAAATTGAAAGCGCAGATAAAAAATCTGGAATCTGAATATGCAGCAAAGGAGAAAGAGATTAAATCTGCAGAAGCCAATTCTGTTGCCCTAAAAAATCAATCAGAAGGCTTCCTTCTTGAATATGACCGTTTGCTAGCAGAAAACCAAAATCTTAGAGATCAACTTCGCTCCATTGATGAAAGTGCGTCTCATTCCAATGGAAAGAAGAATATGTGA | 660 | 39.55 | MIYLFFTVLFVEMITILLLLFKTPLRKLLILGLDRAKRGRAPLVVKSVGATVFVIMMYNVYSVTEIQSRPADVLNPTDQIILAYHMLEASLMGFSLFLSLMIDRLHHYIRELRILRKTMETAKKQNRAAEETKNKGADEVKVLNDEMSKLKAQIKNLESEYAAKEKEIKSAEANSVALKNQSEGFLLEYDRLLAENQNLRDQLRSIDESASHSNGKKNM | 219 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04493 | 219 | Coils | Coil | 105 | 181 | - | - | |
| Lomi2g04493 | 219 | FunFam | B-cell receptor-associated protein 29 | 136 | 199 | - | - | |
| Lomi2g04493 | 219 | Coils | Coil | 189 | 209 | - | - | |
| Lomi2g04493 | 219 | Gene3D | - | 136 | 199 | - | - | |
| Lomi2g04493 | 219 | PANTHER | BCR-ASSOCIATED PROTEIN, BAP | 1 | 200 | IPR008417 | GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04493 | K14009 | B-cell receptor-associated protein 31 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 122977 | Lomi2g04493 | Lomi4g02614 | |
| 324007 | Lomi2g04493 | Lomi1g00174 | |
| 333470 | Lomi1g00174 | Lomi2g04493 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:37378190 | Lomi2g04493 | Lomi-Chr2:49991893 | dispersed | |
| Lomi | Lomi-Chr2:16970072 | Lomi2g04493 | Lomi-Chr2:49991893 | dispersed | |
| Lomi | Lomi-Chr2:37252246 | Lomi2g04493 | Lomi-Chr2:49991893 | dispersed | |
| Lomi | Lomi-Chr2:49991893 | Lomi5g01974 | Lomi-Chr5:30869659 | dispersed | |
| Lomi | Lomi-Chr1:1552959 | Lomi2g04493 | Lomi-Chr2:49991893 | wgd | |
| Lomi | Lomi-Chr2:49991893 | Lomi3g00751 | Lomi-Chr3:6137212 | wgd | |
| Lomi | Lomi-Chr2:49991893 | Lomi4g02614 | Lomi-Chr4:33628182 | wgd |