AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04496 ATGGGAAGCAAGAATGATACATGGTCTGATCAATGGGGAACTGGCGTTTTCGACAATGAAGAAAAACCTTATGAACAGCAGAATACTAATAAGAGCACCAACTCCAACAAGAAGATGGATCAAGTGAAGGCTGCTGCATCGACTGGATTGGTGAAAGCTAAGTCTGCTGCCATTGTTGGAGCTAACAAAATGAAGAAAGGTACCTCCACTAGTTTCAAATGGATCAAGAACAAATGCTCATCTTCTAAATGA 252 40.87 MGSKNDTWSDQWGTGVFDNEEKPYEQQNTNKSTNSNKKMDQVKAAASTGLVKAKSAAIVGANKMKKGTSTSFKWIKNKCSSSK 83
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04496 83 MobiDBLite consensus disorder prediction 1 41 - -
Lomi2g04496 83 PANTHER OS02G0740600 PROTEIN 1 81 - -
Lomi2g04496 83 MobiDBLite consensus disorder prediction 21 41 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04496 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
324006 Lomi2g04496 Lomi1g00169
333471 Lomi1g00169 Lomi2g04496
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:1515940 Lomi2g04496 Lomi-Chr2:50020677 wgd