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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04500 ATGAACCGCCGAAATAGACGCCGTTCCACCACCGCCCATGTCTACCTACGCTATCTAAAGCCCGGCGCACTTGCTCAACTTCGTGATTCCAAAATCAACGCCAGAACTCATCATCGATCAATCGATTCTCAGATCTATCTCTCTCGTGCTAATTCGTCATCGTCGTCGTTGTCACCTGCTTCTGTTTCTTCTCCGTCGCGATCTCCTATCGCCGCCGTTTCCGCTCAGCTACATGAAGGTGCTGCAATTATCGCCGCCGTTGACGGCGGTTCACCGTGCTTTTCCGTTAGGTTTTACGGTCCTCGGTGTCCACAGCGGAAGAAGCTTATGGCTGCTAGATCTATGTTTTTTCCAAACCCTAACCCTAGCAGTCCGACTTCAGATGGTCCTGAACCTGTTATTGATGCTTTTGCCAATGATTTCTTAGTTGCTCATTGA 438 49.77 MNRRNRRRSTTAHVYLRYLKPGALAQLRDSKINARTHHRSIDSQIYLSRANSSSSSLSPASVSSPSRSPIAAVSAQLHEGAAIIAAVDGGSPCFSVRFYGPRCPQRKKLMAARSMFFPNPNPSSPTSDGPEPVIDAFANDFLVAH 145
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04500 145 PANTHER OS06G0679600 PROTEIN 1 145 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04500 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
324003 Lomi2g04500 Lomi1g00166
333474 Lomi1g00166 Lomi2g04500
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:1476733 Lomi2g04500 Lomi-Chr2:50061235 wgd
Lomi Lomi-Chr2:50061235 Lomi5g02213 Lomi-Chr5:32538185 wgd