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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04528 ATGACAACTGAAAATATCGACGTTTCTTCGGCTACTGCTACTGCTACACGTCCAACTATCGAATCATGTAGAAAGAAGAAGTCAGATGATGCAACTTTCTTGCAGGATGTTAAAGATCATATTGATGAGTTTATTCATGCTTCAATGGATGAACATAAAACCTGCTTTAAAAAATCCATCTCAAAGATGTTTGGAATGTCTAAGATTGTGGCAGAGAGAGACGCTGCTGAAAACAAGGGAGTCGAGAGCTCATTGCCCCTTCAAACAGTTACCGATTAG 279 39.43 MTTENIDVSSATATATRPTIESCRKKKSDDATFLQDVKDHIDEFIHASMDEHKTCFKKSISKMFGMSKIVAERDAAENKGVESSLPLQTVTD 92
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04528 92 PANTHER OS03G0724500 PROTEIN 9 90 - -
Lomi2g04528 92 MobiDBLite consensus disorder prediction 1 22 - -
Lomi2g04528 92 MobiDBLite consensus disorder prediction 1 19 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04528 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
122993 Lomi2g04528 Lomi4g02535
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr15:3818583 Lomi2g04528 Lomi-Chr2:50340037 transposed
Lomi Lomi-Chr2:50340037 Lomi4g02535 Lomi-Chr4:32962443 wgd