Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04543 | ATGGGTTCTGGATTTTCATTTTGGGTTCTTTTCCTTCTTTTTTCTCGAATGCATGTGGAAGGAGATGGAGCTACACAAGATAATGTCATAAGACTTAATACCATAGAAGATGATGGTCATGATGTACACCATCATCATGATCCTATCCATCAACATGGTCATGGTCATCATCCATCATCATCATCCACAAATCAAAAAGACCCTCAACTCATGGTCTTCTACATGCTACAAGATCTAAAAGTAGGCCAAGTTAGACCAATTCACTTCCCAAACCGACACCTTTCACCGTCTCAATTGTTGTCCAAACACGAAGCTGATAACATCCCTTTTTCGCTCGTTGAATTACCAAACCTTTTTCGGTTATTCTCAATTTCACAAGGCTCCCCACAAGCTATAGCCATGGAAAGCACACTCAAAGAATGTGAAGTCAAGCCCATCAAGGAAGGTGAAGATGGTGATTTGGTTGAGGCCTTGAGTGTTTGTCACATGGATACGTCTCAATGGAACCGTAATCATGTCTCGTTTGGTGTGCTTGGAGTCGAGCCAGGAACCACCTCGGTTTGCCACTTCTTTCCTAGCGATCATTTCGTGTTCATACCTTCTTCTGCAACCATTTAA | 618 | 42.23 | MGSGFSFWVLFLLFSRMHVEGDGATQDNVIRLNTIEDDGHDVHHHHDPIHQHGHGHHPSSSSTNQKDPQLMVFYMLQDLKVGQVRPIHFPNRHLSPSQLLSKHEADNIPFSLVELPNLFRLFSISQGSPQAIAMESTLKECEVKPIKEGEDGDLVEALSVCHMDTSQWNRNHVSFGVLGVEPGTTSVCHFFPSDHFVFIPSSATI | 205 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04543 | 205 | ProSiteProfiles | BURP domain profile. | 145 | 201 | IPR004873 | - | |
| Lomi2g04543 | 205 | SMART | BURP-2 | 71 | 201 | IPR004873 | - | |
| Lomi2g04543 | 205 | MobiDBLite | consensus disorder prediction | 40 | 64 | - | - | |
| Lomi2g04543 | 205 | Pfam | BURP domain | 149 | 199 | IPR004873 | - | |
| Lomi2g04543 | 205 | Pfam | BURP domain | 72 | 150 | IPR004873 | - | |
| Lomi2g04543 | 205 | PANTHER | BURP DOMAIN PROTEIN USPL1-LIKE | 149 | 201 | IPR044816 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04543 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr2:50459507 | Lomi2g04544 | Lomi-Chr2:50478109 | tandem | |
| Lomi | Lomi-Chr1:1035370 | Lomi2g04543 | Lomi-Chr2:50459507 | wgd |