Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04554 | ATGGGCATTTGCACCTCATGCTACACCGGTTCCACCGCCACAACCACCGTCAAACTCATCCTTTCAGACGGTCAACTTAGAGAATTCCGGTCACCGGTAAAGGCGTTGACGGTTGCGCAACAACCGTGTTCGTTCATTTGCAACGCTGATGAGATGGACTTTAATGAATATGTAACGGCCATGAGTGAACAAGATGAACTTCAGCCCGGTCAACTTTACTTCGAGCTACCATCGAGTTGGTCAAACAAGCGGTTGACTGTGGACGATATGGTTTCGTTAGCGGTTAAAGCCGGTAAGGCACTTATGGTCAACGATGGTAAAGTGAGATGTGGTTGTTGTGTTAAACGGGTTGACCCGTTGGTATTTTGTGATGAAAATGAGACGATGGCGTCATCATGTGGTAGGGTTGGAGGTGGTGGTGATATCGGGAACCACCGTGGTAGCGGTGGTGGTAAACGGCGGTTGGTTACAAGGCTTGAAAGGATAGTAGAATAA | 495 | 48.28 | MGICTSCYTGSTATTTVKLILSDGQLREFRSPVKALTVAQQPCSFICNADEMDFNEYVTAMSEQDELQPGQLYFELPSSWSNKRLTVDDMVSLAVKAGKALMVNDGKVRCGCCVKRVDPLVFCDENETMASSCGRVGGGGDIGNHRGSGGGKRRLVTRLERIVE | 164 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04554 | 164 | PANTHER | DUF4228 DOMAIN PROTEIN-RELATED | 14 | 115 | - | - | |
| Lomi2g04554 | 164 | Pfam | PADRE domain | 1 | 107 | IPR025322 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04554 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr10:8523704 | Lomi2g04554 | Lomi-Chr2:50543324 | dispersed | |
| Lomi | Lomi-Chr12:9068734 | Lomi2g04554 | Lomi-Chr2:50543324 | dispersed | |
| Lomi | Lomi-Chr1:978987 | Lomi2g04554 | Lomi-Chr2:50543324 | dispersed | |
| Lomi | Lomi-Chr2:50543324 | Lomi9g01375 | Lomi-Chr9:25944117 | dispersed | |
| Lomi | Lomi-Chr2:50540486 | Lomi2g04554 | Lomi-Chr2:50543324 | tandem |