AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04562 ATGGGAACACTTGTTGGACATTTAGTACCTGGTTCAGCCCTTGCTCTACTTGGTTTATGGCACATCATCAATACTATCCGAGCCTACCACCAAAAAGGCCCGACCCATTTCAAGTCAACCTTTTGGCACCCGTTTGTGAGCCCGTTCTCCAAACTAACATACATGGAGCTCATGTTTATACTTTCTTTTTCCATATTTTCTATTGTTATGCAGGTTTTGGACTACCCTTTGTTCTCATTCGCTTTCAAGCTCAATAATTACGAGCACGCCACCATGTTTTTACACTTAGTCATATATTCCGGTTTTACCCTTTTTAGCGAATTAACTCATAAATCTGACATCTTATTTGAAGTTACTAGAATCTTAGCTGCTTCTGTTTTTGGTCAAGAGCTTTTTTTACTTCATTATCACTCAGCCGATCATGTGGGACTCGAGGGTCATTACCATTGGCTAATGCAACTTATTGTGATTGTTTCTCTTTTTACAGCTTTATCTGTCACCATGTTTCCATCTAGCTTCCCTTCATCCCTCGTTCTTTCTATATCAGTTGCGTTTCAGGGGTTCTGGTTCATTAACATGGGGTTCATGTTATGGGTCCCTGAGCTAGTCCCTAAAGGGTGCACCATACGGTTAGGCCATGGCGGTGATAGTGACATGCATGGTGCGGTTGTATGTGGAAGCCACAACGCAGTTTTAAGGGCTAAAGGACTAGCTAACTTGCAGTTCAGTTGGATACTAGCTGGCATTTTGATATTTGTGGCGTGTATATGTTTGATTTACCCGAAAAAGGGTGCTCAGAGGGTTCAATCGGTTGAGTATGAACGACTTAACAGTCGAGTTGCTGAGATCCCCTTATCAGTTGGTGGATTTAAGCAAGTTACTTACCCATAA 891 41.98 MGTLVGHLVPGSALALLGLWHIINTIRAYHQKGPTHFKSTFWHPFVSPFSKLTYMELMFILSFSIFSIVMQVLDYPLFSFAFKLNNYEHATMFLHLVIYSGFTLFSELTHKSDILFEVTRILAASVFGQELFLLHYHSADHVGLEGHYHWLMQLIVIVSLFTALSVTMFPSSFPSSLVLSISVAFQGFWFINMGFMLWVPELVPKGCTIRLGHGGDSDMHGAVVCGSHNAVLRAKGLANLQFSWILAGILIFVACICLIYPKKGAQRVQSVEYERLNSRVAEIPLSVGGFKQVTYP 296
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04562 296 PANTHER PROTEINASE INHIBITOR I4, SERPIN (DUF716)-RELATED 1 280 - -
Lomi2g04562 296 Pfam Family of unknown function (DUF716) 118 257 IPR006904 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04562 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
323968 Lomi2g04562 Lomi1g00099
333509 Lomi1g00099 Lomi2g04562
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:39582068 Lomi2g04562 Lomi-Chr2:50586938 dispersed
Lomi Lomi-Chr1:927623 Lomi2g04562 Lomi-Chr2:50586938 wgd