Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04565	ATGGAAACCTTACAAGATCTCATCGAAGAAGCAAAACTTCGTACTGTTTGGTGGACCCTTTTCATTTTCATCGTCACTTACTTCTTAACCCATACAAGTAAATCAATGTGGATGAATGTACCTATAGCAATTGTGATAGTATCAGGGGCTCATTACTTGATAAATGAAGTTGAATTCCATTGGAAGATACGTAAACCGAACCGACAATCTTATCTATCACATTTAGAGAAGAAACAATTGTCTGTAAATGATTCACGTCTTTCGACGTTACCTCCACTGCCTAAATGGAAGAGGAAAATTGATTCTCCGGTAGTCGAGGCTGCTATGGAGGATTTTGTTAACAAAATTTTGCAGGAGTTTGTTATAGAGTTGTGGTATGGGGATATAACGCCTGATAAGGAAGCACCGCAGTTGATACATGCGATTATTATGGATGTTTTTGCAGAAATCTCAACTAGAGTTAAAGATGTAAACCTTGTTGACTTGCTAACGAGGGATGTAGTTGATCTAGTAGGAGATCACTTGGAGCTTTTTAGGAAAAACCAAGCTGCAATTGGGAGAGATGTTATGGCGACATTGTCTTCTGAAGAACGAGATGAACGGTTGAAACATCATCTTATGGCTTCAAAGGAGCTTCATCCAGCTTTGATATCTTCCGAGAGTGAGTACAAGTTTCTTAAGCAGGTTATGGGGGCGCTTTTGGCAGCAGTACTTAGACCAAGAGAAGCTCAATGCCCGTTAGTTCGGTGCATTGTGCGAGAGCTTTTAACATGCTTGGTAATGGAACCTGTAATGAAATTCGCTAGCCCTGGGCAAATCAATGAGTTGATTGAGGGTATTTTCCTCGCCAAAAATAAAGGAGATCAAGAGACTGGTGATGATCAGTCATCTAATGTCACGGGTCAAGACAAGAATCATCCCACTGCTACGAACAAGGAAGCGTGTTCAAATCCACCTGGCACCACTGTTAGTGGTCCGGTTGAAGATGAATCAGGACAGCCACGGTCCTCTGCTTGGGCTCGGGTTCTTGAGGCAGCAACGCAGAGAAGGAGCGAAGTTCTTCAGCCAGAGAATCTTGAAAATATGTGGACTAAAGGAAGAAACTACAAAAAGAAATCTGCTTCAGAAAAAAACAGCGGTTTTAGTGAAACTTCTAATCCGTCAGAATTAATTGATGAAAATTCTAATGTTGCTATCGGAAGTAAACCTAACTCAGAAAAGTCAAATAGCGCTTCTGATTTGAATCTTCAAAATAAAAAAGAAACTGGTGCAATCCAAGTTGGTGGATCAATAATTTCAGAGTTTTATAGTGCCAATGTTGGCGTTAATAATGATACACGTAATGTTAATACTGCTTCCGAAAAAGTAACACGTACTGACGGATATGTTCCAAAGCTTAAGTGCCGAGTTCTAGGAGCATACTTTGAGGAAATTGAATCAAATCCATTTGCAGTATATTCCATTGCGGTAACAGATGTGGTTAACGAGACTTGGTTTGTGAAAAGAAGATACAGGAATTTTGAGAGATTGCACCGCCATCTTAAGGATATTCCTAATTATACATTACATTTGCCTCCTAAAAGGATATTCTCATCTAGCACAGAGGATGCATTTGTTCATCAACGTTGTATACAGCTGGATAAATATCTTCAAGATCTTTTGTCTATAGCTAATATCGCTGAGCAACATGAAGTATGGGATTTCTTGAGCATGTCTTCAAAGAGTTACTCTTTTGGAAGGTCATCATCAGTAGCGAAAACATTAGCAGTCAAGGTGGACGATGCTGTGGATGATGTACGCTATTTCAAAGGTGTTTCAAATAGTTTAATGCGGAAATTTGTCTGTCCGGGTTCTCCTTCTGAGGCTTCTGCTTTAGTCAGAAGAACCAAGCAAACTACCTCTTGTTATTCTGACAATGACGAAGGTGATAAAGATGGGAAATTTCACCATGAGGAAGTGGAATCTCTTAATGATCATAATTTCGATAAAAAATTTAAGTCAAAAGAGAATAAAAGCTCGGAGTTGGATAAGAAAAATGCTTCTGAGGTTCGATCTGAAATACTCAGTCTGGCTGCAACTTTTCCTTCAACTCCTGGTCTCAAGGAAGATCCACTTGGTGTACCGGCAGAGTGGACCCCACCTAATGTAAGTGTTCCATTGCTAAACTTAGTGGACACAATATTTCAACTCAATAGAAGAGGCTGGTTAAGGCGACAAGTGTTTTGGATGTCAAAGCAAATTTTGCAGTTAATGATGGAAGATGCTATTGATGACTGGCTGTTAAGGCAAATTCACTGGCTCAGAAGAGATAGTAGTGTTGCTCAAGGAATTCACTGGATACATGATATTCTGTGGCCTGAAGGCATATTCTTTACAAAACAAAGGATAACACAAACGGATTCTTCTCAATCAAATGAAGGATCTAGCCGGACTCCATCAAACAGTAAAAATAATAATGATAAAGGTTCCTTCGAGGAGCAGCTTGAGGCTGCTCGTAGAGCTAGTGACATAAAAAAGATGATATTCAAGGGAGCACCAAATACATTGGTTAGCTTGATTGGACGGAAGCAATACAAACGAGTTGCGAAAGATGTATATTACTTTCTGCAGTCCGCTGTGTGTTTAAAGCAACTTGGGTATGGTGTACTTGAACTTGCACTCATAACAGTTTTCCCAGAGCTTCAAGAAATCATATCAAATATACATGAGAAGAAAGAAGCCCGGATGGTGTAG	2733	39.74	METLQDLIEEAKLRTVWWTLFIFIVTYFLTHTSKSMWMNVPIAIVIVSGAHYLINEVEFHWKIRKPNRQSYLSHLEKKQLSVNDSRLSTLPPLPKWKRKIDSPVVEAAMEDFVNKILQEFVIELWYGDITPDKEAPQLIHAIIMDVFAEISTRVKDVNLVDLLTRDVVDLVGDHLELFRKNQAAIGRDVMATLSSEERDERLKHHLMASKELHPALISSESEYKFLKQVMGALLAAVLRPREAQCPLVRCIVRELLTCLVMEPVMKFASPGQINELIEGIFLAKNKGDQETGDDQSSNVTGQDKNHPTATNKEACSNPPGTTVSGPVEDESGQPRSSAWARVLEAATQRRSEVLQPENLENMWTKGRNYKKKSASEKNSGFSETSNPSELIDENSNVAIGSKPNSEKSNSASDLNLQNKKETGAIQVGGSIISEFYSANVGVNNDTRNVNTASEKVTRTDGYVPKLKCRVLGAYFEEIESNPFAVYSIAVTDVVNETWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANIAEQHEVWDFLSMSSKSYSFGRSSSVAKTLAVKVDDAVDDVRYFKGVSNSLMRKFVCPGSPSEASALVRRTKQTTSCYSDNDEGDKDGKFHHEEVESLNDHNFDKKFKSKENKSSELDKKNASEVRSEILSLAATFPSTPGLKEDPLGVPAEWTPPNVSVPLLNLVDTIFQLNRRGWLRRQVFWMSKQILQLMMEDAIDDWLLRQIHWLRRDSSVAQGIHWIHDILWPEGIFFTKQRITQTDSSQSNEGSSRTPSNSKNNNDKGSFEEQLEAARRASDIKKMIFKGAPNTLVSLIGRKQYKRVAKDVYYFLQSAVCLKQLGYGVLELALITVFPELQEIISNIHEKKEARMV	910

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04565	910	MobiDBLite	consensus disorder prediction	364	392	-	-
	Lomi2g04565	910	ProSiteProfiles	PX domain profile.	464	576	IPR001683	GO:0035091(InterPro)
	Lomi2g04565	910	MobiDBLite	consensus disorder prediction	800	824	-	-
	Lomi2g04565	910	Pfam	PX domain	495	570	IPR001683	GO:0035091(InterPro)
	Lomi2g04565	910	Pfam	PXA domain	102	278	IPR003114	-
	Lomi2g04565	910	CDD	PX-SNX19-like-plant	466	570	-	-
	Lomi2g04565	910	Gene3D	-	466	580	IPR036871	GO:0035091(InterPro)
	Lomi2g04565	910	SMART	PX-2	472	572	IPR001683	GO:0035091(InterPro)
	Lomi2g04565	910	MobiDBLite	consensus disorder prediction	287	337	-	-
	Lomi2g04565	910	ProSiteProfiles	PXA domain profile.	102	285	IPR003114	-
	Lomi2g04565	910	SMART	PXA-3	102	285	IPR003114	-
	Lomi2g04565	910	MobiDBLite	consensus disorder prediction	292	331	-	-
	Lomi2g04565	910	SUPERFAMILY	PX domain	466	573	IPR036871	GO:0035091(InterPro)
	Lomi2g04565	910	MobiDBLite	consensus disorder prediction	625	647	-	-
	Lomi2g04565	910	MobiDBLite	consensus disorder prediction	800	821	-	-
	Lomi2g04565	910	PANTHER	PX SERINE-THREONINE KINASE PXK	3	906	IPR051837	-
	Lomi2g04565	910	Pfam	Sorting nexin C terminal	735	871	IPR013937	-
	Lomi2g04565	910	MobiDBLite	consensus disorder prediction	378	392	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04565	K17925	sorting nexin-13

Event-related genes

Select	Gene_1	Gene_2	Event_name
	123004	Lomi2g04565	Lomi3g00871
	123005	Lomi2g04565	Lomi4g02507

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr2:50603358	Lomi3g00871	Lomi-Chr3:7103440	wgd
	Lomi	Lomi-Chr2:50603358	Lomi4g02507	Lomi-Chr4:32773213	wgd