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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04566 ATGATGATGAGATCAGCACCTTCCGTTTACTTACCGTCGTTAGCTCCGTCAACGACGATCTGTTGTTCTTCCAGAAACAACGCCTATATACCTAAACTTGAACCGTTTAGCCGAAGCAAAATCGACAGAATCGTTAAGGATCCTCCGTTAATCCAGAAATCCGAAAATGATTTAGCAGATTATTGTTCAACACTGGAAGGAGATCGATCGTACGGTTGCTGGAGAGCGTATTTCGAGCTCAAGGATCTGGAAAAAGAAGCGCCAAAAGAAGTGGTGGAAAGAGTGATACTGGAATCAGGAGGTGTTAAATCACTAATAGGATGTTTACACGGAATATCAGAAATCCACAAGGCGAAAAGGCAATTGGAACATGAGAACGGATCGAGTGCGAGTAATATGAAGGTGGAGAATACACATGTAGATTCAGTTAAAGTTGGAAGAGTTTGTCCGATACCGGATGGATTACCGAAGAGTCGAGAAGAGATGGAGGAAGAAGAGAAAGGGAGAATGCCCGATTCGCCTTTTACTAGATTGCTTCGTTCGAAAGGACGGTCCCCTGCTTGGTACTCCCAAGCTCCTGATCACGAATCGTAA 594 44.11 MMMRSAPSVYLPSLAPSTTICCSSRNNAYIPKLEPFSRSKIDRIVKDPPLIQKSENDLADYCSTLEGDRSYGCWRAYFELKDLEKEAPKEVVERVILESGGVKSLIGCLHGISEIHKAKRQLEHENGSSASNMKVENTHVDSVKVGRVCPIPDGLPKSREEMEEEEKGRMPDSPFTRLLRSKGRSPAWYSQAPDHES 197
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04566 197 MobiDBLite consensus disorder prediction 149 197 - -
Lomi2g04566 197 PANTHER CCG-BINDING PROTEIN 1 17 196 IPR037502 GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0010183(InterPro)|GO:0036033(PANTHER)|GO:0036033(InterPro)
Lomi2g04566 197 MobiDBLite consensus disorder prediction 154 173 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04566 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
123006 Lomi2g04566 Lomi3g00872
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr2:50608462 Lomi3g00872 Lomi-Chr3:7111253 wgd