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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04589 ATGGCATGCTTAAACATGCAAATCAATAATGATCAACAACAACAAGGTGGTTTCTTGGGTCCTAGAATCTCATTCTCAAATGATTTTGGTGATACCCAACAAGCAGCAGCATCAACCAATTTGAAACTCAGTACTTATAGAGAAGCTCCTGTGTCTTCTGAATTCAATTTTGCAGTTCCTTGTTTTTCTTCAAATTCTGCTGATGAACTCTTTTTCAAATCCAAGATTCTGCCATTGAAGGAGAAAGCTATGACACTCAGAGATGAGCTTCTTAATGATGATGATGATGATGACATTTTCTTGCCAAAAACTTCAGGGTGGTGGAGGTTTGGAAGAAGTCAAAGTCAAAGTGTAAATCATAATGCCTGTTTGGCTGCAAAGAAAGTTGATCATAAGAATCATGGTGGTTTGGAGACCATTGATGAAGGAGACCAATATCTCAGGAAATGA 450 37.78 MACLNMQINNDQQQQGGFLGPRISFSNDFGDTQQAAASTNLKLSTYREAPVSSEFNFAVPCFSSNSADELFFKSKILPLKEKAMTLRDELLNDDDDDDIFLPKTSGWWRFGRSQSQSVNHNACLAAKKVDHKNHGGLETIDEGDQYLRK 149
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04589 149 PANTHER OS06G0675200 PROTEIN 8 118 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04589 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
123019 Lomi2g04589 Lomi3g00890
123020 Lomi2g04589 Lomi4g02486
323955 Lomi2g04589 Lomi1g00073
333522 Lomi1g00073 Lomi2g04589
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:727295 Lomi2g04589 Lomi-Chr2:50826842 wgd
Lomi Lomi-Chr12:8856661 Lomi2g04589 Lomi-Chr2:50826842 wgd
Lomi Lomi-Chr2:50826842 Lomi3g00890 Lomi-Chr3:7248379 wgd
Lomi Lomi-Chr2:50826842 Lomi4g02486 Lomi-Chr4:32630845 wgd
Lomi Lomi-Chr2:50826842 Lomi9g01423 Lomi-Chr9:26432421 wgd