Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi3g01845 | ATGGGAACAGAAGTACACTGCAAAAGCTCTTTTGAAGGGTATCACTCCATGAGGGATGTTAATGAGGATTCCAATAGTAGCAGCTGGCCTGTTTTTTATGGAGATAAACCTTTGACGCCTAATGGCGGCCATTATTACAACGGTTTCATACCAAGGACCATTTCAGATACATATCCAGGGTGTGAGAAGGATGCATTAAAGCAAAAGATGCTTGAACATGAAGCCATCTTCAAAAATCAGGTTTATGAACTTCATCGTCTTTATAGAAGACAAAGAGACATGATGGAAGAAGTTAAAAGAAAGGAGTACCATAAGCATCGGATTTCTATGGACACATCATCATCTTCAAGTCTCTTGCCGTCACAAAAGCCTTACGAAGATGGACACAAATGGCAAATACCAAGCTTTCCTTTGACCAACTCCAATTCCGCCAGACCATCTATTTTTGGAGCAGAGATAAATAATTCACCTTTAAGTTGTTCAAAAGGGAATGAAAATAATAATAATAATAGTTCAAAGGATTGTGAAATCATGGAATGTAGTAGACCTTCAAAAGTTAGAAAAAAGTTATTCGATCTTGAACTCCCTCCTGATGAAAACATTGACCATGATGAACACGAGGAAATTCAATATAAACAGGCTTCTGCAGAATCGAGTTATAAAGATACTTCATCGGGTCAATGTTTTAGGGGTTCTAATGGATTGGCTGATCTTAATGAACCTGTCCATGTTGAAGAAGTAATGGCTCATGGGTCGGTTGATCGTTTTGGTCCTTCGGCTAAAAGTGGGTCACCATTTTTTGGCCCAATGCATAATCTCTCTCAAAGTGGACAGCCTAGTAGTGCTTTTAACCATTTATTGCCCGAGGGAAAAAGCAATGGAAGAGATTGGTTGTCAAATGCGCGTGAACAAGGAAATAATAGAAGCAACCTGAACTTCACGCCAGGAACGTATCCCGAAATTCCAACAAGAATTCAGGATCATCCCCATTTTAGCCAAACCCCTTTACCGTTTCCGACTTCACGTACACCTAGTTCATACCCTTACACAGATATGGGAAATTCATGGGGAAAACCGAATGGTAGTTTGACTCATAAGTTGACCTCATTTCAGAAACAACCCTCTTTTGTACCGTCTCCACAAAGTCATCCCGTTTTCGGAGATAAATGGCGTACAAATGGATTTTCTACACCAAATGGAATTTACCGTGGGTTGTCATCCGGGTCAAAAGATCCATATGCCCGTCTGCCTTCTGTTGGGTTTGATAACCGACAGTGCAGTAATCTGGATGATAGGTCACAAAAGATCTTCAAAGCTTCAAACTTTATCGATTTGACTGATACTACCAAAGGCATTGACTTGAACAACGACAGCAATAGTGAAAGAAAATGCGATCAAACAGTACCCTCATGGCTTCAAGCCAAGCCAGCAATCTGTAAAAATGATACTTCGGGTAATAATGGAAAGATTCTCAGGTTTCCAGCTTTTGGGAATTCTTGTGCTGCGAAAAATGATTCTTCGTCACTGGTATCCACTTCAGCGTCCCTTCTTTGTCCTGAAAATGGAAAAATAAAAACAGAAATGGAACACAAAGGGTTTGACATCAATGTGGCTTATGTGGAAGCTTGTAATGTTGAGAGAGAAACTGATACAGAAATTGAGAAAATCAAGAATCATTTTGACTTAAATTCGTGCTTGACCGAGGAGGAAGATGTTCTACTATCCGAGTCTGTTAAAAGTTCAAGTCAGAACTCAAAGAAGAAAACATTCGACATCGACTTAGAAGCTCCAGCTGAGGAAGAAGCCGTCGATGAGGTAAAAAAATCTGACGATTTTGACGATGATTCACTTGCAAAGGTAGCAGCTGAAGCAATAGTTGCGATGACTGGGATATCCTGTCAGCAAGATCAAGCGGGGTCCAGCTCTGAGGTGGCGGTTTGTTCTGACGATCTTGATGATGATCGCCTCTTATTATTAATTGAGGCAATTGAAAATGGGGGTTCAGTTACTACCGAGTTGGATGAATATGAACAGTTGACTTTGCAACTAGAGTTGACCAAAGAAGAAGATTACATGCCAAAGCCTTTGGGACCTGATTTCCGCGAACCCGAAGAAGTGGGCCCGTCAACAGGCCTGACTCGACCCAGAAGAGGTCAAGCAAGGCGTGGTAGGCCCAGGAGGGACTTCCAAAGGGACATCCTTCCCGGGCTGGTTTCACTTTCAAGGCACGAGGTAACTGAAGATATTCAAATATTCGGTGGGTTAATGAGAGCTACAGGGCACTCTTGGAATGTAGGACTGACTAGAAGAAATGGAACACGGGGAAGACGGAAGTCTGTTGCAGTGTCTGTTGAGCCGCCTACTGCCACCACCCCACTATCGCCACCGCTACCATTGTCGGAGGTGGTAGGATTGGAGGAAAGAAGCCTAACAGGGTGGGGTAAGACGACTAGACGACCTCGGAGACAACGATGTGCTGCAGGTAGTAGCTCTGTGGCTGTCCAGTTAACGTAA | 2514 | 42.72 | MGTEVHCKSSFEGYHSMRDVNEDSNSSSWPVFYGDKPLTPNGGHYYNGFIPRTISDTYPGCEKDALKQKMLEHEAIFKNQVYELHRLYRRQRDMMEEVKRKEYHKHRISMDTSSSSSLLPSQKPYEDGHKWQIPSFPLTNSNSARPSIFGAEINNSPLSCSKGNENNNNNSSKDCEIMECSRPSKVRKKLFDLELPPDENIDHDEHEEIQYKQASAESSYKDTSSGQCFRGSNGLADLNEPVHVEEVMAHGSVDRFGPSAKSGSPFFGPMHNLSQSGQPSSAFNHLLPEGKSNGRDWLSNAREQGNNRSNLNFTPGTYPEIPTRIQDHPHFSQTPLPFPTSRTPSSYPYTDMGNSWGKPNGSLTHKLTSFQKQPSFVPSPQSHPVFGDKWRTNGFSTPNGIYRGLSSGSKDPYARLPSVGFDNRQCSNLDDRSQKIFKASNFIDLTDTTKGIDLNNDSNSERKCDQTVPSWLQAKPAICKNDTSGNNGKILRFPAFGNSCAAKNDSSSLVSTSASLLCPENGKIKTEMEHKGFDINVAYVEACNVERETDTEIEKIKNHFDLNSCLTEEEDVLLSESVKSSSQNSKKKTFDIDLEAPAEEEAVDEVKKSDDFDDDSLAKVAAEAIVAMTGISCQQDQAGSSSEVAVCSDDLDDDRLLLLIEAIENGGSVTTELDEYEQLTLQLELTKEEDYMPKPLGPDFREPEEVGPSTGLTRPRRGQARRGRPRRDFQRDILPGLVSLSRHEVTEDIQIFGGLMRATGHSWNVGLTRRNGTRGRRKSVAVSVEPPTATTPLSPPLPLSEVVGLEERSLTGWGKTTRRPRRQRCAAGSSSVAVQLT | 837 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi3g01845 | 837 | PANTHER | TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED | 17 | 825 | - | - | |
| Lomi3g01845 | 837 | MobiDBLite | consensus disorder prediction | 813 | 837 | - | - | |
| Lomi3g01845 | 837 | Pfam | Plant protein of unknown function (DUF863) | 343 | 456 | IPR008581 | - | |
| Lomi3g01845 | 837 | Pfam | Plant protein of unknown function (DUF863) | 461 | 825 | IPR008581 | - | |
| Lomi3g01845 | 837 | Pfam | Plant protein of unknown function (DUF863) | 144 | 222 | IPR008581 | - | |
| Lomi3g01845 | 837 | Pfam | Plant protein of unknown function (DUF863) | 219 | 319 | IPR008581 | - | |
| Lomi3g01845 | 837 | Coils | Coil | 669 | 689 | - | - | |
| Lomi3g01845 | 837 | MobiDBLite | consensus disorder prediction | 105 | 126 | - | - | |
| Lomi3g01845 | 837 | MobiDBLite | consensus disorder prediction | 691 | 728 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi3g01845 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 321378 | Lomi3g01845 | Lomi4g01652 | |
| 328543 | Lomi4g01652 | Lomi3g01845 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr3:15659098 | Lomi8g00934 | Lomi-Chr8:8023275 | dispersed | |
| Lomi | Lomi-Chr12:10118001 | Lomi3g01845 | Lomi-Chr3:15659098 | wgd | |
| Lomi | Lomi-Chr3:15659098 | Lomi4g01652 | Lomi-Chr4:24547377 | wgd |