AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi4g01632 ATGGGATTTATTGCAGGGCCTCTCAACATACATAAGGACCATGCTTTCAACACAAGCTCTTCTAAGTGCTATAGGAGTTGGAGAGAAATCAGCAACAGTCATTGGAGCTACTTTTCAGTGGTTTTTGAGGGATTTAACTGGAATGCTTGGAGGTGTCATGTTCACATTCTATCAGGAATGCTAATGGACCTTGTATCTCCATTGTTTCCTTCGGCATTTGCATTCATTGTCTGCATAGGGAGTTTGTCAAGATCTTTCACTGGTGTTGCGAGTGGAGCAACTAGAGCTGCTTTGACCCAACATTTTGCTCTTCAGAATAACGCAGCAGATATATCTGCAAAGGAAGGAAGCCAAGAGACAGTTGCAACAATGATTGGAATGGCTTTAGGAATGCTTCTTGCGCACATTACAATGGGACATACAACGATCATATGGTTCTCTTTTCTGTGCCTAACGATGTTCCACATGTATGCTAATTACAAAGCCGTTCGGTGCTTAAATCTGACTACATTAAACTGTGAACGAAGCTCAATTCTTTTGCAGCATTTCATGGAGACTGGCCAAGTTCTCTCTCCGAGAGAGGTCTCAGTCTTGGAGCATGTCTCACCGTTATGGATCAATTCTTGGAGCTCAAAGACCGCCAAATTTTTGTATACAAGGGTACAATTAGGTGTGAGGGTTTCCTCACTAAACGGCCCAGAAATGACGGAGTTATTAAGTTCTGCTGGATCTCGATACGAAAAAGCAAAATACCTGTTACTTGAGAATAATGGAATTATCCGCGTTGTTATGCATAAAGATTCAACTGTTGGAGATGTCATGCGGGGTTTTCTTCATGCTCTTGTGATGGCAAATCTTTTGGATCATAAGCCTATGTCATTACATACTGATAGCCAAACATGGATGGACAAAAACTATGAAGCATTTCTTTTGAAGCTTCAATCGTCTGGTTGGAAAACAGAGCGACTTTTGTCATCATCTATCATTTGGAGGGCAAACTGGAGCCTTGGGATCCCATATAAAAAAATAAACTAG 1035 41.35 MGFIAGPLNIHKDHAFNTSSSKCYRSWREISNSHWSYFSVVFEGFNWNAWRCHVHILSGMLMDLVSPLFPSAFAFIVCIGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMIGMALGMLLAHITMGHTTIIWFSFLCLTMFHMYANYKAVRCLNLTTLNCERSSILLQHFMETGQVLSPREVSVLEHVSPLWINSWSSKTAKFLYTRVQLGVRVSSLNGPEMTELLSSAGSRYEKAKYLLLENNGIIRVVMHKDSTVGDVMRGFLHALVMANLLDHKPMSLHTDSQTWMDKNYEAFLLKLQSSGWKTERLLSSSIIWRANWSLGIPYKKIN 344
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi4g01632 344 Pfam Vitamin B6 photo-protection and homoeostasis 58 186 IPR054549 -
Lomi4g01632 344 PANTHER RUS1 FAMILY PROTEIN C16ORF58 59 333 IPR006968 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi4g01632 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
321365 Lomi3g01868 Lomi4g01632
328556 Lomi4g01632 Lomi3g01868
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr3:15888527 Lomi4g01632 Lomi-Chr4:24374712 wgd