Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi4g01648	ATGTACAACCGGCATATGGCATCAGCGGCAATTGTTACTCGCGGCGGACAACCAAGTGATAGTGGTGATGCAGTGGTGACTCTTGATCAAGTTCCTAAATGGAGTGATGGAGATTTTAGATATTCTTATGAGATTGAAGATCCTAATTTTCCAAACATGTATTTTCCTGATCCATTAACGTCGTCTTCTGGGGCAGAAAGTAGTGGGAAAGTTTCTAGGTTTCCAGTTGACCATGAAGTTAATTCGAAGATTTATCTTTGGAGAGGTAATCCCTGGAATCTTGAGGTAGATGCTGTTGTCAACTCTACAAATGAGAACTTGGATGAAGCGCATTGCAGTCCTGGTTTGCATGCTACAGCTGGGCCGGGTCTTGCTGAAGAATGTGCGACATTGGGTGGTTGCAGAACAGGAATGGCAAAAGTTACTAATGCATATGATCTTCCTGCAAGGAGAGTTATACATACAGTTGGGCCTAAGTACGCTGTGAAATATCATACTGCAGCTGAAAATGCTTTGAGTCACTGCTATCGCTCTTGTCTAGAACTCCTCATTGAGAATGGGCTTCAAAGCATTGCTATGGGTTGTATATACACAGAGGCAAAACATTACCCTCGGGAACCAGCAGCCCACGTGGCAATAAGAACTGTGCGCCGGTTTCTTGAGAAACAAAAGAGTGAAATCTCAGGTGTAGTCTTTTGCTTAACGACAACAAATGATACTGAAATATATAAGAGATTGCTTCCTCTCTACTTTCCCCGAGATAATAAGGAGGAAGAGATTGCCATTTCCAAGCTTCCTGCTGATGTTGGAGATGAAAATGGTGAAACGGTAATAGACGAACGAAAAATCAGAATAAAACCATTACCAAATATCAAGAAAACTATTCCTAAACCTCCCCGAGCTTCACTAGATGTTCCTGTTAGTGATCAAGGATTGACTAGACGGAACTCTTCATATTTGGAATCATATTTGGATCCCGCTTTCATGTCCATAATTAAAGATCCTGATCAACGACGCACGGAACAATGGGAAAGAACTGCTCGAGCACAAAATGGGTTCAACTTTGCTAAAATGTTAGGGTTTGGTGACCTTGGGGGCCCAGCTCTTTCTGCCGCTGAAGAGTATTCGCTACATTCTAGATACCTCGTAAAAGCAAATTCTCTTAGTCTTTCCGAAATAGCAGAAATGAAGATTCTGTATCGGGGAGGAGTAGACAGTGAAGGTCGCCCAGTAATGGTTGTCGTTGGAGCACATTTTCTCCTCCGATGCCTTGATCTTGAAAGATTTGTTCTTCATGTAGTAAAGGAGTTTGAACCCTTGATCCAGAAACCCTATAGCATTGTTTACTTCCACTCTGCTGCATCTTTACAAGTGCAGCCAGATCTGGGATTTATGAGGAGATTACAGCAAATACTTGGTAGAAAAAGCCAGCGGAATCTTCATGAAATATATATCCTACACCCGACCTTTGGACTGAAGGCTGCCATACTTGCATTGCAACTATTAGTGGATGGCATGGTGTGGAAAAAGGCTGTATATGTTGATCGACTTCTTCAGCTTTTCAGATACGTTCCTCGTGAGCAGCTAACAATCCCCGACTTTGTGTTCCAGCACGACTTGGAAGTGAACGGAGGAAAAGGGCTAATTGTGGATCCAAGAACGAAATACGTATACCATCGACCATAG	1686	42.76	MYNRHMASAAIVTRGGQPSDSGDAVVTLDQVPKWSDGDFRYSYEIEDPNFPNMYFPDPLTSSSGAESSGKVSRFPVDHEVNSKIYLWRGNPWNLEVDAVVNSTNENLDEAHCSPGLHATAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLQSIAMGCIYTEAKHYPREPAAHVAIRTVRRFLEKQKSEISGVVFCLTTTNDTEIYKRLLPLYFPRDNKEEEIAISKLPADVGDENGETVIDERKIRIKPLPNIKKTIPKPPRASLDVPVSDQGLTRRNSSYLESYLDPAFMSIIKDPDQRRTEQWERTARAQNGFNFAKMLGFGDLGGPALSAAEEYSLHSRYLVKANSLSLSEIAEMKILYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLHVVKEFEPLIQKPYSIVYFHSAASLQVQPDLGFMRRLQQILGRKSQRNLHEIYILHPTFGLKAAILALQLLVDGMVWKKAVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYHRP	561

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi4g01648	561	Pfam	Macro domain	100	212	IPR002589	-
	Lomi4g01648	561	CDD	SEC14	396	532	IPR001251	-
	Lomi4g01648	561	CDD	Macro-GDAP2-like	82	250	IPR035793	-
	Lomi4g01648	561	SUPERFAMILY	CRAL-TRIO domain	391	529	IPR036865	-
	Lomi4g01648	561	SUPERFAMILY	Macro domain-like	70	280	IPR043472	-
	Lomi4g01648	561	SMART	YBR022w-8	83	212	IPR002589	-
	Lomi4g01648	561	MobiDBLite	consensus disorder prediction	1	24	-	-
	Lomi4g01648	561	Gene3D	Leucine Aminopeptidase, subunit E, domain 1	17	256	IPR043472	-
	Lomi4g01648	561	PANTHER	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	21	285	-	-
	Lomi4g01648	561	ProSiteProfiles	Macro domain profile.	71	251	IPR002589	-
	Lomi4g01648	561	Pfam	Divergent CRAL-TRIO domain	408	539	IPR001251	-
	Lomi4g01648	561	ProSiteProfiles	CRAL-TRIO lipid binding domain profile.	386	535	IPR001251	-
	Lomi4g01648	561	Gene3D	-	391	542	IPR036865	-
	Lomi4g01648	561	SMART	sec14-4	392	538	IPR001251	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi4g01648	K24997	ganglioside-induced differentiation-associated protein 2

Event-related genes

Select	Gene_1	Gene_2	Event_name
	321376	Lomi3g01849	Lomi4g01648
	328545	Lomi4g01648	Lomi3g01849

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr4:24513845	Lomi6g01078	Lomi-Chr6:12176591	dispersed
	Lomi	Lomi-Chr3:15682464	Lomi4g01648	Lomi-Chr4:24513845	wgd